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Resources and Technical Notes on Differential Display

Technical Support

Technical Notes & Resources
     Optimal arbitrary primer length
     Degeneracy of the arbitrary 13mers
     One-base versus two-base anchored primers
     Number of arbitrary primers and gene coverage
     Comparison of DD with other methodologies
     False Positives in DD
     Frequently asked questions and trouble-shooting
References on Differential Display
Differential Display Methods And Protocols Book
Differential Display Newsletter
Differential Display Summer Workshop

Representative DD Reference Lists compiled by GenHunter


A) Representative DD Reference List (Sorted by Fields of Application)
B) Representative DD Reference List (Sorted Chronologically)





A) Representative DD Reference List

(Sorted by Fields of Application)

Reference numbers underlined in green are from GenHunter customers


Differential Display Methodology

1.Liang, P. and Pardee, A.B.: Differential display of eukaryotic messenger RNA by means of the polymerase chain reaction. Science. 1992, 257:967-71.
4.Liang, P. et al: Distribution and cloning of eukaryotic mRNAs by means of differential display: refinements and optimization. Nucleic Acids Res. 1993, 21:3269-75.
9.Liang, P. et al: Analysis altered gene expression by differential display. Methods in Enzymol. 1995, 254:304-21.
10.Liang, P. et al: Differential display using one-base anchored oligo-dT primers. Nucleic Acids Res. 1994, 22:5763-64.
11.Liang, P. et al: Method of differential display. Methods in Mol. Genetics. (Academic Press) 1994, 5:3-16.
12.Chen, Z. et al: A cautionary note on the reaction tubes for differential display and cDNA amplification in thermal cycling. BioTechniques. 1994, 16:1003-1006.
14.Wang, X. and Feuerstein, G.Z.: Direct sequencing of DNA isolated from mRNA differential display. BioTechniques. 1995, 18:448-52.
15.Trentmann, S.M. et al: Alternatives to 35S as a label for the differential display of eukaryotic messenger RNA. Science. 1995, 267:1186-87.
17.Guimaraes, M.J. et al: Differential Display by PCR: novel findings and applications. Nucleic Acids Res. 1995, 23:1832-33.
26.Liang, P. and Pardee, A.B.: Recent advances in differential display. Current Opinion in Immunology. 1995, 7:274-80.
29.Všgeli-Lange, R. et al: Rapid selection and classification of positive clones generated by mRNA differential display. Nucleic Acids Res. 1996, 24:1385-86.
31.Zhang, H. et al: Differential screening of gene expression difference enriched by differential display. Nucleic Acids Res. 1996, 24:2454-55.
41.Wan, J.S. et al: Cloning differentially expressed mRNAs. Nature Biotechnology. 1996, 14:1685-91.
122.Liang, P.: Factors ensuring successful use of differential display. Methods: A Companion to Methods in Enzymology. 1998, 16:361-364.
130.Matz, M.V. and Lukyanov, S.A: Different strategies of differential display: areas of application. Nucleic Acids Res. 1998, 26:5537-5543.
171.Trenkle, T. et al: Differential display probes for cDNA arrays. BioTechniques. 1999, 27:554-564.
187.Rajeevan, M.S. et al: Chemiluminescent analysis of gene expression on high-density filter arrays. J. Histochemistry & Cytochemistry. 1999, 47:337-342.
193.Brenner, Sydney: Sillycon valley fever. Current Biology. 1999, 9:R671.
207.Bosch, I. et al: Identification of differentially expressed genes from limited amounts of RNA. Nucleic Acids Res. 2000, 28:e27.
254.Liang, P..: Gene discovery using Differential Display. Genetic Engineering News. 2000, 20:37.
255.Mir, K. U.: The hypothesis is there is no hypothesis. Trends in Genetics. 2000, 16:63-64.
256.Wooster, R.: Cancer classification with DNA microarrays, is less more? Trends in Genetics. 2000, 16:327-329.
264.Cho, Y.-J. et al: Multicolor fluorescent differential display. BioTechniques. 2001, 30:562-572.
265.Gibbs, W. W.: Shrinking to enormity: DNA microarrays are reshaping basic biology-but scientists fear they may soon drown in the data. Scientific American. 2001, 284:33-34.
349.Kaserer, K. et al: Construction of cDNA libraries from microdissected benign and malignantthyroid tissue. Laboratory Investigation. 2002, 82:1707-1714.
452.Yang, S. and Liang, P.: Global analysis of gene expression by differential display - A mathematical model. Molecular Biotechnology. 2004, 27:197-208.

Applications in Mammalian Systems

Cancer Research

2.Liang, P. et al: Differential display and cloning of messenger RNAs from human breast cancer versus mammary epithelial cells. Cancer Research. 1992, 52:6966-68.
3.Zhang, L. and Medina, D.: Gene expression screening for specific genes associated with mouse mammary tumor development. Mol. Carcinog. 1993, 8:123-26.
5.Sun, Y. et al: Molecular cloning of five messenger RNAs differentially expressed in preneoplastic or neoplastic JB6 mouse epidermal cells: one is homologous to human tissue inhibitor of metaloproteinase. Cancer Research. 1994, 54:1139-44.
6.Liang, P. et al: Ras activation of genes: Mob-1 as a model. Proc. Natl. Acad. Sci. USA. 1994, 91:12515-125119.
13.Okamato, K. and Beach, D.: Cyclin G is a transcription target of the p53 tumor suppressor protein. The EMBO Journal. 1994, 13: 4816-22.
16.McCarthy, S.A. et al: Rapid induction of heparin-binding epidermal growth factor/diphtheria toxin receptor expression by Raf and Ras oncogenes. Genes & Development. 1995, 9:1953-64.
22.Luna et al: Decreased expression and function of a-2 macroglobulin receptor/low density lipoprotein receptor-related protein in photodynamic therapy-resistant mouse tumor cell. Cancer Research. 1995, 55:1820-23.
23.van Groningen, J.J.M. et al: Identification of melanoma inhibitory activity and other differentially expressed messenger RNAs in human melanoma cell lines with different metastatic capacity by messenger RNA differential display. Cancer Research. 1995, 55:6237-6243.
28.Tan, R. et al: Identification of the Lysyl Oxidase Gene as a target of the Antioncogenic Transcription Factor, IRF-1 and its possible role in tumor suppression. Cancer Research. 1996, 56:2417-21.
32.Scholz, G. et al: Transcriptional down regulation of the nov proto-oncogene in fibroblast transformed by p60v-src Mol. Cell. Biol. 1996, 16:481-86.
33.Francia, G. et al: Identification by differential display of annexin VI, a gene differentially expressed during melanoma progression. Cancer Research. 1996, 56:3855-58.
34.Lehar, S.M. et al: Identification and cloning of EI24, a gene induced by p53 in etoposide-treated cells. Oncogene. 1996, 12:1181-87.
36.Murphy, M. et al: Wild-type p53 negatively regulates the expression of a microtubule-associated protein. Genes & Development. 1996, 10:2971-80.
37.Wang, F.L. et al: Two differentially expressed genes in normal human prostate tissue and in carcinoma. Cancer Research. 1996, 56:3634-37.
54.Topol, L.Z. et al.: Identification of drm, a novel gene whose expression is suppressed in transformed cells and which can inhibit growth of normal but not transformed cells in culture. Mol. Cell. Biol. 1997, 17:4801-10.
55.Israeli, D. et al.: A novel p53-inducible gene, PAG608, encodes a nuclear zinc finger protein whose overexpression promotes apoptosis. The EMBO Journal. 1997, 16:4384-92.
58.Fiscella, M. et al.: Wip1, a novel human protein phosphatase that is induced in response to ionizing radiation in a p53-dependent manner. Proc. Natl. Acad. Sci. USA. 1997, 94:6048-53.
66.Li, D. et al: Oncogenic Raf-1 induces the expression of non-his-tone chromosomal architectural protein HMGI-C via a p44/p42 mitogen-activated protein kinase-dependent pathway in salivary epithelial cells. J. Biol. Chem. 1997, 272:25062-25070.
74.You, M. et al.: ch-IAP1, a member of the inhibitor-of-apoptosis protein family, is a mediator of the antiapoptotic activity of the v-Rel oncoprotein. Mol. Cell. Biol. 1997, 17:7328-7341.
83.You, L. and Jakowlew, S.B.: Identification of early growth response gene-1 (Egr-1) as a phorbol myristate acetate-induced gene in lung cancer cells by differential mRNA display. American J. of Respiratory Cell & Mol. Biol. 1997, 17:617-624.
84.Riley, H.D. et al: The expression of acylphosphatase is associated with the metastatic phonotype in human colorectal tumors. Carcinogenesis. 1997, 18:2453-2455.
87.Kasukabe, T. et al: TRA1, a novel mRNA highly expressed in leukemogenic mouse monocytic sublines but not in nonleukemogenic sublines. Blood. 1997, 89:2975-2985.
98.Lawlor, E.R. et al: The Ewing tumor family of peripheral primitive neuroectodermal tumors expresses human gastrin-releasing peptide. Cancer Research. 1998, 58:2469-2476.
103.Kotelvets, L. et al: Inhibition by platelet-activating factor of Src- and hepatocyte growth factor-dependent invasiveness of intestinal and kidney epithelial cells: Phosphatidylinosital 3Ő-kinase is a critical mediator of tumor invasion. J. Biol. Chem. 1998, 273:14138-14145.
113.Bein, K. et al: Myb-dependent regulation of thrombospondin 2Ęexpression. Role of mRNA stability. J. Biol. Chem. 1998, 273:21423-21429.
116.Zhang, R. et al: Identification of rCop-1, a new member of the CCN protein family, as a negative regulator for cell transformation. Mol. Cell. Biol. 1998, 18:6131-6141.
117.Castagnino, P. et al: Induction of tissue inhibitor of metallopro-teinases -3 is a delayed early cellular response to hepatocyte growth factor. Oncogene. 1998, 17:481-492.
123.Jo, H. et al: Cloning oncogenic Ras-regulated genes by differential display. Methods: A Companion to Methods in Enzymology. 1998, 16:365-372.
124.Arakawa, H. et al: Identification and characterization of the ARP1 gene, a target for the human acute leukemia ALL1 gene. Proc. Natl. Acad. Sci. USA. 1998, 95:4573-4578.
135.Liu, Y. and Kulesz-Martin, M.F.: Altered gene expression in a clonal epidermal cell model of carcinogenesis identified by RNA differential display. Carcinogenesis. 1998, 19:683-686.
152.Reimer, C.L. et al: Altered regulation of cyclin G in human breast cancer and its specific localization at replication foci in response to DNA damage in p53+/+ cells. J. Biol. Chem. 1999, 274:11022-11029.
155.Taylor, C.T. et al: Critical role of cAMP response element binding protein expression in Hypoxia-elicited induction of epithelial tumor necrosis factor-a. J. Biol. Chem. 1999, 274:19447-19454.
169.Thrash-Bingham, C.A. and Tartof, K.D.: aHIF: A natural antisense transcript overexpressed in human renal cancer and during hypoxia. J. Natl. Cancer Inst. 1999, 91:a143-a151.
174.Hisamatsu, T. et al: Interferon-inducible gene family 1-8U expression in colitis-associated colon cancer and severely inflamed mucosa in ulcerative colitis. Cancer Research. 1999, 59:5927-5931.
175.Fournier, M.V. et al: Identification of a gene encoding a human oxysterol-binding protein-homologue: a potential general molecular marker for blood dissemination of solid tumors. Cancer Research. 1999, 59:3748-3753.
176.Bussemakers, M.J.G. et al: DD3: A new prostate-specific gene, highly overexpressed in Prostate Cancer. Cancer Research. 1999, 59:5975-5979.
178.Park, B.-W. et al: Induction of the Tat-binding protein 1 gene accompanies the disabling of oncogenic erbB receptor tyrosine kinases. Proc. Natl. Acad. Sci. USA. 1999, 96:6434-6438.
180.Cmarik, J.L. et al: Differentially expressed protein Pdcd4 inhibits tumor promoter-induced neoplastic transformation. Proc. Natl. Acad. Sci. USA 1999, 96:14037-14042.
181.Lo, P.-K. et al: Identification of a novel mouse p53 target gene DDA3. Oncogene. 1999, 18:7765-7774.
201.Tanaka, H. et al: A ribonucleotide reductase gene involved in a p53-dependent cell-cycle checkpoint for DNA damage. Nature. 2000, 404:42-49.
208.Chen, H.-M. et al: AZU-1: A candidate breast tumor suppressor and biomarker for tumor progression. Mol. Biol. of the Cell. 2000, 11:1357-1367.
226.Tanaka, T. et al: Expression of stress-response and cell proliferation genes in renal cell carcinoma induced by oxidative stress. American Journal of Pathology. 2000, 156:2149-2157.
228.Zhang, Z. and DuBois, R.N.: Par-4, a proapoptotic gene, is regulated by NSAIDs in human colon carcinoma cells. Gastroenterology. 2000, 118:1012-1017.
233.Foca, C. et al: Identification and partial characterization of differentially expressed mRNAs in normal human endometria and endometrial carcinomas by differential display RT-PCR. Molecular Human Reproduction. 2000, 6:712-718.
239.Lin, Y. et al: Pidd, a new death-domain-containing protein, is induced by p53 and promotes apoptosis. Nature Genetics. 2000, 26:124-127.
243.Ohki, R. et al: Reprimo, a new candidate mediator of the p53-mediated cell cycle arrest at the G(2) phase J. Biol. Chem. 2000, 275:22627-22630.
249.Li, P.-X. et al: Placental transforming growth factor-b is a downstream mediator of the growth arrest and apoptotic response of tumor cells to DNA damage and p53 overexpression. J. Biol. Chem. 2000, 275:20127-20135.
250.Zhang, R. et al: Identification of a novel ligand-receptor pair constitutively activated by Ras oncogenes. J. Biol. Chem. 2000, 275:24436-24443.
252.Wu, H. et al: Autocrine gastrins in colon cancer cells up-regulate cytochrome c oxidase Vb and down-regulate efflux of cytochrome c and activation of caspase-3. J. Biol. Chem. 2000, 275:32491-32498.
253.Gu, Z. et al: ei24, a p53 response gene involved in growth suppression and apoptosis. Mol. Cell. Biol. 2000, 20:233-241.
257.Oda, E.,et al: Noxa, a BH3-only member of the Bcl-2 family and candidate mediator of p53-induced apoptosis. Science. 2000, 288:1053-1058.
258.Wang, D. et al: MGSA/GRO-mediated melanocyte transformation involves induction of Ras expression. Oncogene. 2000, 19:4647-4659.
259.Frederick, M.J. et al: In vivo expression of the novel CXC chemokine BRAK in normal and cancerous human tissue. American Journal of Pathology. 2000, 156:1937-1950.
261.Deininger, M.W.N. et al: BCR-ABL tyrosine kinase activity regulates the expression of multiple genes implicated in the pathogenesis of chronic myeloid leukemia. Cancer Research. 2000, 60:2049-2055.
263.Bueno, R. et al: The a folate receptor is highly activated in malignant pleural mesothelioma. J. Thoracic & Cardiovascular Surgery. 2001, 121:225-233.
282.Lo, P. et al: Identification of a mouse thiamine transporter gene as a direct transcriptional target for p53. J. Biol. Chem. 2001, 276:37186-37193.
287.Karumanchi, S.A. et al: VHL tumor suppressor regulates Cl-/HCO3- exchange and Na+/H+ exchange activities in renal carcinoma cells. Physiological Genomics. 2001, 5:119-128.
292.Smith, B.A. et al: Identification of genes involved in human urothelial cell-matrix interactions: implications for the progression pathways of malignant urothelium. Cancer Research. 2001, 61:1678-1685.
293.Hsu, N. et al: Overexpression of dihydrodiol dehydrogenase as a prognostic marker of non-small cell lung cancer. Cancer Research. 2001, 61:2727-2731.
294.Mariani, L. et al: Identification and validation of P311 as a glioblastoma invasion gene using laser capture microdissection. Cancer Research. 2001, 61:4190-4196.
295.Shridhar, V. et al: Loss of expression of a new member of the DNAJ protein family confers resistance to chemotherapeutic agents used in the treatment of ovarian cancer. Cancer Research. 2001, 61:4258-4265.
296.Dong, G. et al: Molecular profiling of transformed and metastatic murine squamous carcinoma cells by differential display and cDNA microarray reveals altered expression of multiple genes related to growth, apoptosis, angiogenesis, and the NF-B signal pathway. Cancer Research. 2001, 61:4797-4808.
297.Matsuyama, A. et al: Hepatoma-derived growth factor is associated with reduced sensitivity to irradiation in esophageal cancer. Cancer Research. 2001, 61:5714-5717.
298.Segawa, N. et al: Phosphorylation of mitogen-activated protein kinase is inhibited by calcitonin in DU145 prostate cancer cells. Cancer Research. 2001, 61:6060-6063.
299.Luker, K.E. et al: Overexpression of IRF9 confers resistance to antimicrotubule agents in breast cancer cells. Cancer Research. 2001, 61:6540-6547.
300.Chung, J. et al: Novel transmembrane GTPase of non-small cell lung cancer identified by mRNA differential display. Cancer Research. 2001, 61:8873-8879.
317.Yiu, G.K. et al: SPARC (Secreted Protein Acidic and Rich in Cysteine) induces apoptosis in ovarian cancer cells. American Journal of Pathology. 2001, 159:609-622.
333.Mariani, L. et al: Death-associated Protein 3 (Dap-3) is overexpressed in invasive glioblastoma cells in vivo and in glioma cell lines with induced motility phenotype in vitro. Clinical Cancer Research. 2001, 7:2480-2489.
349.Kaserer, K. et al: Construction of cDNA libraries from microdissected benign and malignantthyroid tissue. Laboratory Investigation. 2002, 82:1707-1714.
350.Wang, M. et al: Interleukin 24 (MDA-7/MOB-5) signals through two heterodimeric receptors, IL-22R1/IL-20R2 and IL-20R1/IL-20R2. J. Biol. Chem. 2002, 277:7341-7347.
351.Deng, H.B. et al: Increased expression of dihydrodiol dehydrogenase induces resistance to cisplatin in human ovarian carcinoma cells. J. Biol. Chem. 2002, 277:15035-15043.
355.Kim, D. et al: GADD153-mediated anticancer effects of N-(4-hydroxyphenyl)retinamide on human hepatoma cells. J. Biol. Chem. 2002, 277:38930-38938.
358.Brandt, B. et al: Early placenta insulin-like growth factor (pro-EPIL) is overexpressed and secreted by c-erbB-2-positive cells with high invasion potential. Cancer Research. 2002, 62:1020-1024.
359.Shekhar, M.P.V. et al: Rad6 overexpression induces multinucleation, centrosome amplification, abnormal mitosis, aneuploidy, and transformation. Cancer Research. 2002, 62:2115-2124.
360.Neef, R. et al: Identification of the human PHLDA1/TDAG51 gene: down-regulation in metastatic melanoma contributes to apoptosis resistance and growth deregulation. Cancer Research. 2002; 62:5920-5929.
367.Schultheis, B. et al: Overexpression of SOCS-2 in advanced stages of chronic myeloid leukemia: possible inadequacy of a negative feedback mechanism. Blood. 2002, 99:1766-1775.
370.Cheng, Q. et al: Identification of molecular markers for the early detection of human squamous cell carcinoma of the uterine cervix. British Journal of Cancer. 2002, 86:274-281.
377.Gordon, G.J. et al: Inhibitor of apoptosis protein-1 promotes tumor cell survival in mesothelioma. Carcinogenesis. 2002, 23:1017-1024.
379.Utsunomiya, T. et al: G protein g7 expression as a new clinicopathological marker in patients with intrahepatic cholangiocarcinoma. Archives of Surgery. 2002, 137:181-185.
382.Liu, S. et al: Down-regulation of Annexin A10 in hepatocellular carcinoma is associated with vascular invasion, early recurrence, and poor prognosis in synergy with p53 mutation. American Journal of Pathology. 2002, 160:1831-1837.
383.Steenbergen, R.D.M. et al: Down-regulation of GATA-3 expression during human papillomavirus-mediated immortalization and cervical carcinogenesis. American Journal of Pathology. 2002, 160:1945-1951.
386.Ahola, T.M. et al: Progestin upregulates G-protein-coupled receptor 30 in breast cancer cells. European J. Biochem. 2002, 269:2485-2490.
387.Gabrilovich, D.I. et al: H1ˇ histone and differentiation of dendritic cells. A molecular target for tumor-derived factors. J. Leukoc. Biol. 2002, 72:285-296.
389.Wightman, J. et al: Retinoic acid-induced growth arrest and differentiation: retinoic acid up-regulates CD32 (FcgRII) expression, the ectopic expression of which retards the cell cycle. Mol. Cancer Therapeutics. 2002, 1:493-506.
413.Mahloogi, H. et al: Overexpression of the calcium sensor visinin-like protein-1 leads to a cAMP-mediated decrease of in vivo and in vitro growth and invasiveness of squamous cell carcinoma Cells. Cancer Research. 2003, 63:4997-5004.
415.Gonzalez, H.E. et al: Identification of 9 genes differentially expressed in head and neck squamous cell carcinoma. Archives of Otolaryngology-Head and Neck Surgery. 2003, 129:754-759.
424.Inagaki, T. et al: The retinoic acid-responsive proline-rich protein is identified in promyeloleukemic HL-60 cells. J. Biol. Chem. 2003, 278:51685-51692.
429.Lemaire, F. et al: Differential expression profiling of head and neck squamous cell carcinoma (HNSCC). British Journal of Cancer. 2003, 89:1940-1949.
431.Ko, J. et al: Identification and differential expression of novel human cervical cancer oncogene HCCR-2 in human cancers and its involvement in p53 stabilization. Oncogene. 2003, 22:4679-4689.
432.Leng, R.P. et al: Pirh2, a p53-induced ubiquitin-protein ligase, promotes p53 degradation. Cell. 2003, 112:779-791.
439.Lee, Y.I. et al: Human hepatitis B virus-X protein alters mitochondrial function and physiology in human liver cells. J. Biol. Chem. 2004, 279:15460-15471.
441.Stein, S. et al: NDRG1 is necessary for p53-dependent apoptosis. J. Biol. Chem. 2004, 279:48930 - 48940.
443.Tanaka, T. et al: Redox regulation of annexin 2 and its implications for oxidative stress-induced renal carcinogenesis and metastasis. Oncogene. 2004, 23:3980-3989.
444.Dong, G. et al: Metastatic squamous cell carcinoma cells that overexpress c-Met exhibit enhanced angiogenesis factor expression, scattering and metastasis in response to hepatocyte growth factor. Oncogene. 2004, 23:6199-6208.
445.Karp, C.M. et al: Identification of HRPAP20: A novel phosphoprotein that enhances growth and survival in hormone-responsive tumor cells. Cancer Research. 2004, 64:1016-1025.
446.Arnold, N.B. et al: Thioredoxin is downstream of Smad7 in a pathway that promotes growth and suppresses cisplatin-induced apoptosis in pancreatic cancer. Cancer Research. 2004, 64:3599-3606.
447.Fang, M.Z. et al: Over-expression of gastrin-releasing peptide in human esophageal squamous cell carcinomas. Carcinogenesis. 2004, 25:865-871.
448.Ha, S.-A. et al: Cancer-associated expression of minichromosome maintenance 3 gene in several human cancers and its involvement in tumorigenesis. Clinical Cancer Research. 2004, 10:8386-8395.
449.Mori, M. et al: Expression of apoptosis inhibitor protein Mcl1 linked to neuroprotection in CNS neurons. Cell Death and Differentiation. 2004, 11:1223-1233.
450.Li, S. et al: Preferential expression of hPGFS in primary SCCHN and tumour cell lines derived from respiratory and digestive organs. British Journal of Cancer. 2004, 90:1093-1099.
451.Bharti, S. et al: Novel membrane protein shrew-1 targets to cadherin-mediated junctions in polarized epithelial cells. Mol. Biol. of the Cell. 2004, 15:397-406.
471.Thomas, E.K. et al: Endo180 binds to the c-terminal region of type I collagen. J. Biol. Chem., 2005, 280:22596-22605.
473.Park, J.-H. et al: Identification of the genes involved in enhanced fenretinide-induced apoptosis by parthenolide in human hepatoma cells. Cancer Research. 2005, 65:2804-2814.
474.Jacques, C. et al: Two-step differential expression analysis reveals a new set of genes involved in thyroid oncocytic tumors. J. Clin. Endocrinology & Metabolism. 2005, 90:2314-2320.
475.Bardeesy, N. et al: Role of epidermal growth factor receptor signaling in RAS-driven melanoma. Mol. Cell. Biol. 2005, 25:4176-4188.
476.Yoo, Y.A. et al: Mitochondrial ribosomal protein L41 suppresses cell growth in association with p53 and p27Kip1. Mol. Cell. Biol. 2005, 25:6603-6616.
477.Zhang, H.M. et al: Gamma interferon-inducible protein 10 induces HeLa cell apoptosis through a p53-dependent pathway initiated by suppression of human papillomavirus type 18 E6 and E7 expression. Mol. Cell. Biol. 2005, 25:6247-6258.
479.Zhang, Y. et al: The human mineral dust-induced gene, mdig, is a cell growth regulating gene associated with lung cancer. Oncogene. 2005, 24:4873-4882.
480.Carles, A. et al: Head and neck squamous cell carcinoma transcriptome analysis by comprehensive validated differential display. Oncogene. 2005, 10.1038/sj.onc.1209203.
494.Miki, Y. et al: Expression of the steroid and xenobiotic receptor and its possible target gene, organic anion transporting polypeptide-A, in human breast carcinoma. Cancer Research. 2006, 66:535-542.
495.Culjkovic, B. et al: eIF4E is a central node of an RNA regulon that governs cellular proliferation. J. Cell Biology. 2006, 175:415-426.
496.Ishimaru, N. et al: Novel role for RbAp48 in tissue-specific, estrogen deficiency-dependent apoptosis in the exocrine glands. Mol. Cell. Biol. 2006, 26:2924-2935.
497.Isachenko, N. et al: High expression of shMDG1 gene is associated with low metastatic potential of tumor cells. Oncogene. 2006, 25:317-322.
498.Mai, R.-T. et al: Hepatitis C virus core protein recruits nucleolar phophoprotein B23 and coactivator p300 to relieve the repression effect of transcriptional factor YY1 and B23 gene expression. Oncogene. 2006, 25:448-462.
499.Chen, J. et al: The carbonic anhydrase I locus contains a c-Myb target promoter and modulates differentiation of murine erythroleukemia cells. Oncogene. 2006, 25:2758 - 2772.
500.Chen, Y.-J. et al: DSG3 is overexpressed in head neck cancer and is a potential molecular target for inhibition of oncogenesis. Oncogene. 2006, DOI 10.1038/sj.onc.1209802.
501.Tong, S. et al: The activation of TC10, a Rho small GTPase, contributes to v-Rel-mediated transformation. Oncogene. 2006, DOI 10.1038/sj.onc.1210023.

Apoptosis and Cell Death

74.You, M. et al.: ch-IAP1, a member of the inhibitor-of-apoptosis protein family, is a mediator of the antiapoptotic activity of the v-Rel oncoprotein. Mol. Cell. Biol. 1997, 17:7328-7341.
91.Padanilam, B.J. and Hammerman, M.R.: Ischemia-induced receptor for activated C kinase (RACK1) expression in rat kidneys. Am. J. Physiol: Renal Physiology. 1997, 272:F160-166.
92.Lewington, A.J. et al: Induction of calcyclin after ischemic injury to rat kidney. Am. J. Physiol: Renal Physiology. 1997, 273:F380-385.
97.Wu, M.X. et al: IEX-1L, an apoptosis inhibitor involved in NF-kB-mediated cell survival. Science. 1998, 281:998-1001.
161.Duan, H. et al: SAG, a novel zinc RING finger protein that protects cells from apoptosis induced by redox agents. Mol. Cell. Biol. 1999, 19:3145-3155.
170.Schneider, T.J. et al: A novel gene coding for a Fas apoptosis inhibitory molecule (FAIM) isolated from inducibly Fas-resistant B lymphocytes. J. Experimental Medicine. 1999, 189:949-956.
179.Garcia-Domingo, D. et al: DIO-1 is a gene involved in onset of apoptosis in vitro, whose misexpression disrupts development. Proc. Natl. Acad. Sci. USA. 1999, 96:7992-7997.
186.Holthofer, H. et al: Altered gene expression and functions of mitochondria in human nephrotic syndrome. The FASEB Journal. 1999, 13:523-532.
192.Gomes, I. et al: A proline- and glutamine-rich protein promotes apoptosis in neuronal cells. J. Neurochemistry. 1999, 73:612-622.
239.Lin, Y. et al: Pidd, a new death-domain-containing protein, is induced by p53 and promotes apoptosis. Nature Genetics. 2000, 26:124-127.
249.Li, P.-X. et al: Placental transforming growth factor-b is a downstream mediator of the growth arrest and apoptotic response of tumor cells to DNA damage and p53 overexpression. J. Biol. Chem. 2000, 275:20127-20135.
252.Wu, H. et al: Autocrine gastrins in colon cancer cells up-regulate cytochrome c oxidase Vb and down-regulate efflux of cytochrome c and activation of caspase-3. J. Biol. Chem. 2000, 275:32491-32498.
257.Oda, E.,et al: Noxa, a BH3-only member of the Bcl-2 family and candidate mediator of p53-induced apoptosis. Science 2000, 288:1053-1058.
278.Moriwaki, Y. et al: Mycobacterium bovis Bacillus calmette-guerin and its cell wall complex induce a novel lysosomal membrane protein, SIMPLE, that bridges the missing link between lipopolysaccharide and p53-inducible Gene, LITAF(PIG7), and estrogen-inducible gene, EET-1. J. Biol. Chem. 2001, 276:23065-23076.
441.Stein, S. et al: NDRG1 is necessary for p53-dependent apoptosis. J. Biol. Chem. 2004, 279:48930 - 48940.
446.Arnold, N.B. et al: Thioredoxin is downstream of Smad7 in a pathway that promotes growth and suppresses cisplatin-induced apoptosis in pancreatic cancer. Cancer Research. 2004, 64:3599-3606.
449.Mori, M. et al: Expression of apoptosis inhibitor protein Mcl1 linked to neuroprotection in CNS neurons. Cell Death and Differentiation. 2004, 11:1223-1233.
460.Jaleel, M.A. et al: Stromal cell-derived factor-1 (SDF-1) signalling regulates human placental trophoblast cell survival. Molecular Human Reproduction. 2004, 10:901-909.
473.Park, J.-H. et al: Identification of the genes involved in enhanced fenretinide-induced apoptosis by parthenolide in human hepatoma cells. Cancer Research. 2005, 65:2804-2814.
477.Zhang, H.M. et al: Gamma interferon-inducible protein 10 induces HeLa cell apoptosis through a p53-dependent pathway initiated by suppression of human papillomavirus type 18 E6 and E7 expression. Mol. Cell. Biol. 2005, 25:6247-6258.
492.Tang, D.C. et al: The hydroxyurea-induced small GTP-binding protein SAR modulates gamma-globin gene expression in human erythroid cells. Blood. 2005, 106:3256-3263.
496.Ishimaru, N. et al: Novel role for RbAp48 in tissue-specific, estrogen deficiency-dependent apoptosis in the exocrine glands. Mol. Cell. Biol. 2006, 26:2924-2935.
503.Schnell, S. et al: Gimap4 accelerates T-cell death. Blood. 2006, 108:591-599.

Toxicology and Toxin Inducible Genes

96.Levy, F.H. and Kelly, D.P.: Regulation of ATP synthase subunit e gene expression by hypoxia: cell differentiation stage-specific control. Am. J. Physiol: Cell Physiology. 1997, 272:C457-465.
104.Gao, L. et al: A novel response to dioxin. Induction of ecto-ATPase gene expression. J. Biol. Chem. 1998, 273:15358-15365.
121.Zhou, D. et al: Cap43, a novel gene specifically induced by Ni2+ compounds. Cancer Research. 1998, 58:2182-2189.
183.Miura, N. et al: Protective effects of triterpene compounds against the cytotoxicity of cadmium in HepG2 cells. Mol. Pharmacology. 1999, 56:1324-1328.
315.Thai, S. et al: Detection of early gene expression changes by differential display in the livers of mice exposed to dichloroacetic acid. Carcinogenesis. 2001, 22:1317-1322.

Heart Disease

7.Utans, U. et al: Chronic cardiac rejection: identification of five up-regulated genes in transplanted hearts by differential mRNA display. Proc. Natl. Acad. Sci. USA. 1994, 91:6463-67.
8.Russell, M. et al: Identification and up-regulation of galactose/N-acetylgalactosamine macrophage lectin in rat cardiac allografts with arteriosclerosis. J. Clin. Invest. 1994, 94:722-30.
24.Autieri et al: Use of differential display to identify differentially expressed mRNAs induced by rat carotid balloon angioplasty. Laboratory Investigation. 1995, 72:656-61.
35.Chen, J. et al: Identification of differentially expressed genes in rat aortic allograft vasculopathy. American Journal of Pathology. 1996, 149:597-611.
45.Kokame, K. et al: Homocysteine-respondent genes in vascular endothelial cells identified by differential display analysis. GRP78/BiP and novel genes. J. Biol. Chem. 1996, 271:29659-29665.
68.Jeyaseelan, R. et al: A novel cardiac-restricted target for doxorubicin. Carp, a nuclear modulator of gene expression in cardiac progenitor cells and cardiomyocytes. J. Biol. Chem. 1997, 272:22800-22808.
69.Jeyaseelan, R. et al: Molecular mechanisms of doxorubicin-induced cardiomyopathy. Selective suppression of reiske iron-sulfur protein, ADP/ATP translocase, and phosphofructokinase genes is associated with ATP depletion in rat cardiomyocytes. J. Biol. Chem. 1997, 272:5828-5832.
86.Lee, M.-E. and Haber, E.: Collagen VIII is expressed by vascular smooth muscle cells in response to vascular injury. Circulation Research. 1997, 80:532-541.
94.Sirokman, G. et al: Endogenous retroviral transcripts in myocytes from spontaneously hypertensive rats. Hypertension. 1997, 30:88-93.
142.Wigle, D.A. et al: AML1-like transcription factor induces serine elastase activity in ovine pulmonary artery smooth muscle cells. Circulation Research. 1998, 252-263.
162.Tang, S.Q. et al: Enhancement of endothelial cell migration and in vitro tube formation by TAP20, a novel beta 5 integrin-modulating, PKC theta-dependent protein. J. Cell Biology. 1999, 147:1073-1083.
164.Zibara, K. et al: Identification and cloning of a new gene (2A3-2), homologous to human translational elongation factor, upregulated in a proliferating rat smooth muscle cell line and in carotid hyperplasia. Arterioscler, Thromb. & Vasc. Biol. 1999, 19:1650-1657.
165.Yang, D. et al: Viral myocarditis: identification of five differentially expressed genes in coxsackievirus B3-infected mouse heart. Circulation Research. 1999, 84:704-712.
166.Rittner, H.L. et al: Tissue-destructive macrophages in giant cell arteritis. Circulation Research. 1999, 84:1050-1058.
197.Singh, K. et al: Myocardial osteopontin expression coincides with the development of heart failure. Hypertension. 1999, 33:663-670.
260.Sheikh-Hamad, D. et al: Regulation of stanniocalcin in MDCK cells by hypertonicity and extracellular calcium. Am. J. Physiol: Renal Physiology. 2000, 278:F417-424.
276.Nechiporuk, T et al: ETL, a novel seven-transmembrane receptor that is developmentally regulated in the heart. ETL is a member of the secretin family and belongs to the epidermal growth factor-seven-transmembrane subfamily. J. Biol. Chem. 2001, 276: 4150-4157.
281.Hosoda, T. et al: A novel myocyte-specific gene Midori promotes the differentiation of P19CL6 cells into cardiomyocytes. J. Biol. Chem. 2001, 276:35978-35989.
289.Ngimbous, B.B. et al: Heart transplantation changes the expression of distinct gene families. Physiological Genomics. 2001, 7:115-126.
348.Wolf, G. et al: Angiotensin IIŐs antiproliferative effects mediated through AT2-receptors depend on down-regulation of SM-20. Laboratory Investigation. 2002, 82:1305-1317.
376.Nickenig, G. et al: Redox-sensitive vascular smooth muscle cell proliferation is mediated by GKLF and Id3 in vitro and in vivo. FASEB J. 2002, 16:1077-1086.
384.Mueller, C. et al: Identification of a novel redox-sensitive gene, Id3, which mediates angiotensin IIĐinduced cell growth. Circulation. 2002, 105:2423-2428.
416.Unoki, H. et al: Up-regulation of cyr61 in vascular smooth muscle cells of spontaneously hypertensive rats. Laboratory Investigation. 2003, 83:973-982.
420.Thorne, G.D. and Paul, R.J.: Effects of organ culture on arterial gene expression and hypoxic relaxation: role of the ryanodine receptor. Am. J. Physiol: Cell Physiology. 2003, 284:C999-1005.
425.Villablanca, A.C. et al: Differential regulation of gene expression by ovariectomy in mouse aorta. Physiological Genomics. 2003, 12:175-185.
427.Thorne, G.D. and Paul, R.J.: Effects of organ culture on arterial gene expression and hypoxic relaxation: role of the ryanodine receptor. Am. J. Physiol: Lung Cell. & Molec. Physiol. 2003, 284:C999-1005.
504.Ishihata, A. and Katano, Y.: Investigation of differentially expressed genes in the ventricular myocardium of senescent rats. Ann. N.Y. Acad. Sci. 2006, 1067:142-151.

Developmental Biology and Cell Differentiation

18.Guimaraes, M.J.: et al: A new approach to the study of haematopoietic development in the yolk sac and embryoid bodies. Development. 1995, 121: 3335-46.
39.Dietz, U.H. and Sandell, L.J.: Cloning of a retinoic acid-sensitive mRNA expressed in cartilage and during chondrogenesis. J. Biol. Chem. 1996, 271:3311-16.
47.Bush, E.W. et al: Overexpression of myotonic dystrophy kinase in BC[(3)]H1 cells induces the skeletal muscle phenotype. J. Biol. Chem. 1996, 271:548-552.
72.Catalano R.D. et al: Differential display to identify and isolate novel genes expressed during spermatogenesis. Molecular Human Reproduction. 1997, 3:215-221.
77.Rafaeloff, R. et al: Cloning and sequencing of the pancreatic islet neogenesis associated protein (INGAP) and its expression in islet neogenesis in hamsters. J. Clin. Invest. 1997, 99:2100-2109.
81.Lorentz, O. et al: Key role of the Cdx2 homeobox gene in extracellular matrix-mediated intestinal cell differentiation. J. Cell Biology. 1997, 139:1553-1565.
82.Schwiebert, L.M. et al: Identification of novel inducible genes in airway epithelium. American J. of Respiratory Cell & Mol. Biol. 1997, 17:106-113.
85.Maekawa, T.L. et al: A novel gene (drad-1) expressed in hematopoiesis-supporting stromal cell lines, ST2, PA6 and A54 preadipocytes: Use of mRNA differential display. Stem Cells. 1997, 15:334-339.
88.Karginova, E.A. et al: Zis: A developmentally regulated gene expressed in juxtaglomerular cells. Am. J. Physiol: Cell Physiology. 1997, 273:731F-738F.
93.Karginova, E.A. et al: Zis: a developmentally regulated gene expressed in juxtaglomerular cells. Am. J. Physiol: Renal Physiology. 1997, 273:F731-738.
101.Noel, L.S. et al: RoBo-1, a novel member of the urokinase plasminogen activator receptor/CD59/Ly-6/snake toxin family selectively expressed in rat bone and growth plate cartilage. J. Biol. Chem. 1998, 273:3878-3883.
105.Takeda, K. et al: Identification of a novel bone morphogenetic protein-responsive gene that may function as a noncoding RNA. J. Biol. Chem. 1998, 273:17079-17085.
112.Hu, S-I et al: Human HtrA, an evolutionarily conserved serine protease identified as a differentially expressed gene product in osteoarthritic cartilage. J. Biol. Chem. 1998, 273:34406-34412.
128.Tohonen, V. et al: Testatin: A cystatin-related gene expressed during early testis development. Proc. Natl. Acad. Sci. USA. 1998, 95:14208-14213.
129.Semizarov, D. et al: A lineage-specific protein kinase crucial for myeloid maturation. Proc. Natl. Acad. Sci. USA. 1998, 95:15412-15417.
140.Dovat, S. et al: Targeted identification of zinc finger genes expressed in rat lungs. Am. J. Physiol: Lung Cell. & Molec. Physiol. 1998, 275:30L-37L.
151.Hiki, K. et al: Cloning, characterization, and chromosomal location of a novel human K+-Cl- cotransporter. J. Biol. Chem. 1999, 274:10661-10667.
153.Murdock, D.G et al: Up-regulation of nuclear and mitochondrial genes in the skeletal muscle of mice lacking the heart/muscle isoform of the adenine nucleotide translocator. J. Biol. Chem. 1999, 274:14429-14433.
154.Kaiser, A. et al: All-trans-retinoic acid-mediated growth inhibition involves inhibition of human kinesin-related protein HsEg5. J. Biol. Chem. 1999, 274:18925-18931.
156.Hollnagel, A. et al: Id genes are direct targets of bone morphogenetic protein induction in embryonic stem cells. J. Biol. Chem. 1999, 274:19838-19845.
157.Chen, D. et al: Cloning and uterus/oviduct-specific expression of a novel estrogen-regulated gene (ERG1). J. Biol. Chem. 1999, 274:32215-32224.
158.Akiyama, H. et al: Molecular cloning and biological activity of a novel Ha-Ras suppressor gene predominantly expressed in skeletal muscle, heart, brain, and bone marrow by differential display using clonal mouse EC cells, ATDC5. J. Biol. Chem. 1999, 274:32192-32197.
163.Xu. B. et al: Identification of a stress-induced protein during human trophoblast differentiation by differential display analysis. Biol. Reproduction. 1999, 61:681-686.
167.Weiler, S.R. et al: D3: A gene induced during myeloid cell differentiation of Linlo c-Kit+ Sca-1+ progenitor cells. Blood. 1999, 93:527-536.
168.Walden, P.D. et al: Mitogenic activation of human prostate-derived fibromuscular stromal cells by bradykinin. British J. Pharmacology. 1999, 127:220-226.
185.Lurton, J. et al: Isolation of a gene product expressed by a subpopulation of human lung fibroblasts by Differential Display. American J. Respiratory Cell & Mol. Biol. 1999, 20:327-331.
203.Antonio, C. et al: Xkid, a chromokinesin required for chromosome alignment on the metaphase plate. Cell. 2000, 102:425-435.
220.Schmidt, J.V. et al: The Dlk1 and Gtl2 genes are linked and reciprocally imprinted. Genes & Development. 2000, 14:1997-2002.
227.Hashimoto, M. et al: Isolation and localization of type IIb Na/Pi cotransporter in the developing rat lung. American Journal of Pathology. 2000, 157:21-27.
229.Zhang, M. et al: Light ethanol consumption enhances liver regeneration after partial hepatectomy in rats. Gastroenterology. 2000, 118:1333-1339.
230.Fujii, S. et al: Differential expression of neuroendocrine-specific protein in form-deprived chick eyes. Invest. Ophthalmology & Vis. Sci. 2000, 41:1533-1541.
231.Feldkaemper, M.P. et al: Changes in retinal and choroidal gene expression during development of refractive errors in chicks. Invest. Ophthalmology & Vis. Sci. 2000, 41:1623-1628.
234.Fritsche, J. et al: Molecular cloning and characterization of a human metalloprotease disintegrin - a novel marker for dendritic cell differentiation. Blood. 2000, 96:732-739.
251.Haertel-Wiesmann, M. et al: Regulation of cyclooxygenease-2 and periostin by Wnt-3 in mouse mammary epithelial cells. J. Biol. Chem. 2000, 275:32046-32051.
277.Jheon, A.H. et al: Characterization of a novel KRAB/C2H2 zinc finger transcription factor involved in bone development. J. Biol. Chem. 2001, 276:18282-18289.
281.Hosoda, T. et al: A novel myocyte-specific gene Midori promotes the differentiation of P19CL6 cells into cardiomyocytes. J. Biol. Chem. 2001, 276:35978-35989.
284.Kearns, A.E. et al: Cloning and characterization of a novel protein kinase that impairs osteoblast differentiation in vitro. J. Biol. Chem. 2001, 276:42213-42218.
285.Gori, F. et al: Cloning and characterization of a novel WD-40 repeat protein that dramatically accelerates osteoblastic differentiation. J. Biol. Chem. 2001, 276:46515-46522.
288.Li, H. et al: Rat mitochondrial ATP synthase ATP5G3: cloning and upregulation in pancreas after chronic ethanol feeding. Physiological Genomics. 2001, 6:91-98.
290.Jhaveri, M.S. et al: Impact of extracellular folate levels on global gene expression. Mol. Pharmacology. 2001, 60:1288-1295.
307.Silverman, M.D. et al: Cell adhesion molecule expression in cultured human iris endothelial cells. Invest. Ophthalmology & Vis. Sci. 2001, 42:2861-2866.
308.Weterings, K. et al: Regional localization of suspensor mRNAs during early embryo development. Plant Cell. 2001, 13:2409-2425.
312.Gregorio-King, C.C. et al: ORP-3, a human oxysterol-binding protein gene differentially expressed in hematopoietic cells. Blood. 2001, 98:2279-2281.
316.Bell, S.E. et al: Differential gene expression during capillary morphogenesis in 3D collagen matrices: regulated expression of genes involved in basement membrane matrix assembly, cell cycle progression, cellular differentiation and G-protein signaling. J. Cell Science. 2001, 114:2755-2773.
318.Doi, M. et al: Light-induced phase-delay of the chicken pineal circadian clock is associated with the induction of cE4bp4, a potential transcriptional repressor of cPer2 gene. Proc. Natl. Acad. Sci. USA. 2001, 98:8089-8094.
325.Minami, N. et al: Analysis of gene expression in mouse 2-cell embryos using fluorescein differential display: comparison of culture environments. Biol. Reproduction. 2001, 64:30-35.
327.Iida, H. et al: Spermatid-specific expression of Iba1, an ionized calcium binding adapter molecule-1, in rat testis. Biol. Reproduction. 2001, 64:1138-1146.
328.Ma, J. et al: Regulation of zygotic gene activation in the preimplantation mouse embryo: global activation and repression of gene expression. Biol. Reproduction. 2001, 64:1713-1721.
329.Robert, C. et al: Differential display and suppressive subtractive hybridization used to identify granulosa cell messenger RNA associated with bovine oocyte developmental competence. Biol. Reproduction. 2001, 64:1812-1820.
344.Torres, M.S.T. et al: Assessment and application of laser microdissection for analysis of gene expression in the rhesus monkey endometrium. Biol. Reproduction. 2002, 67:1067-1072.
345.Baran, N. et al: Characterization of a prolactin-regulated gene in reproductive tissues using the prolactin receptor knockout mouse model. Biol. Reproduction. 2002, 66:1210-1218.
346.Doiguchi, M. et al: Complementary DNA cloning and characterization of rat spergen-1, a spermatogenic cell-specific gene-1, containing a mitochondria-targeting signal. Biol. Reproduction. 2002, 66:1462-1470.
347.Espey, L.L. and Richards, J.S.: Temporal and spatial patterns of ovarian gene transcription following an ovulatory dose of gonadotropin in the rat. Biol. Reproduction. 2002, 67:1662-1670.
352.Christian, M. et al: Cyclic AMP-induced forkhead transcription factor, FKHR, cooperates with CCAAT/enhancer-binding protein b in differentiating human endometrial stromal cells. J. Biol. Chem. 2002, 277:20825-20832.
353.Chipuk, J.E. et al: Identification and characterization of a novel rat ov-serpin family member, trespin. J. Biol. Chem. 2002, 277:26412-26421.
361.Haddad, A. et al: New class of cargo protein in tetrahymena thermophila dense core secretory granules. Eukaryotic Cell. 2002, 1:583-593.
368.Giraudier, S. et al: Overexpression of FKBP51 in idiopathic myelofibrosis regulates the growth factor independence of megakaryocyte progenitors. Blood. 2002, 100:2932-2940.
372.Iqbal, M.J. et al: Differentially abundant mRNAs in rat liver in response to diets containing soy protein isolate. Physiological Genomics. 2002, 11:219-226.
393.Valerius, M.T. et al: Hoxa 11 is upstream of integrin a8 expression in the developing kidney. Proc. Natl. Acad. Sci. USA. 2002, 99:8090-8095.
395.Lefebvre, B. et al: Chromosomal integration of retinoic acid response elements prevents cooperative transcriptional activation by retinoic acid receptor and retinoid x receptor. Mol. Cell. Biol. 2002, 22:1446-1459.
401.Matsuoka, T. et al: Members of the large maf transcription family regulate insulin gene transcription in islet § cells. Mol. Cell. Biol. 2003, 23:6049-6062.
402.Nguyen, M.M. et al: Requirement of PDZ-containing proteins for cell cycle regulation and differentiation in the mouse lens epithelium. Mol. Cell. Biol. 2003, 23:8970-8981.
407.Iida, H. et al: Complementary DNA cloning and characterization of rat spergen-2, a spermatogenic cell-specific gene 2 encoding a 56-kilodalton nuclear protein bearing ankyrin repeat motifs. Biol. Reproduction. 2003, 69:421-429.
408.Okulicz, W.C. and Ace, C.I.: Temporal regulation of gene expression during the expected window of receptivity in the rhesus monkey endometrium. Biol. Reproduction. 2003, 69:1593-1599.
409.Baran, N. et al: Decysin, a new member of the metalloproteinase family, is regulated by prolactin and dteroids during mouse pregnancy. Biol. Reproduction. 2003, 68:1787-1792.
424.Inagaki, T. et al: The retinoic acid-responsive proline-rich protein is identified in promyeloleukemic HL-60 cells. J. Biol. Chem. 2003, 278:51685-51692.
434.Chigira, S. et al: Increased expression of the huntingtin interacting protein-1 gene in cells from Hutchinson Gilford Syndrome (progeria) patients and aged donors. J. Gerontology Biol. Sci. Med. Sci. 2003, 58:B873-878.
438.Beyer, C. et al: Regulation of gene expression in the developing midbrain by estrogen: implication of classical and nonclassical steroid signaling. Ann. N.Y. Acad. Sci. 2003, 1007:17-28.
440.Scobey, M.J. et al: The Id2 transcriptional repressor is induced by follicle-stihormone and cAMP. J. Biol. Chem. 2004, 279:16064 - 16070.
460.Jaleel, M.A. et al: Stromal cell-derived factor-1 (SDF-1) signalling regulates human placental trophoblast cell survival. Molecular Human Reproduction. 2004, 10:901-909.
461.Iida, H. et al: Molecular cloning of rat Spergen-3, a spermatogenic cell-specific gene-3, encoding a novel 75-kDa protein bearing EF-hand motifs. J. Andrology. 2004, 25:885-892.
465.Shi, C. et al: Integrin engagement regulates monocyte differentiation through the forkhead transcription factor Foxp1. J. Clin. Invest. 2004, 114:408-418.
471.Thomas, E.K. et al: Endo180 binds to the c-terminal region of type I collagen. J. Biol. Chem., 2005, 280:22596-22605.
478.Lin, J.-C. and Tarn, W.-Y.: Exon selection in alpha-Tropomyosin mRNA is regulated by the antagonistic action of RBM4 and PTB. Mol. Cell. Biol., 2005, 25:10111-10121.
489.Paredes, A. et al: Loss of synaptonemal complex protein-1, a synaptonemal complex protein, contributes to the initiation of follicular assembly in the developing rat ovary. Endocrinology. 2005, 146:5267-5277.
502.Wang, S.-Z. et al: An oligodendrocyte-specific zinc-finger transcription regulator cooperates with Olig2 to promote oligodendrocyte differentiation. Development. 2006, 133:3389-3398.
504.Ishihata, A. and Katano, Y.: Investigation of differentially expressed genes in the ventricular myocardium of senescent rats. Ann. N.Y. Acad. Sci. 2006, 1067:142-151.

Signal Transduction and Growth Factor Actions

25.Sakuma et al: Radiation induction of the receptor tyrosine kinase gene ptk-3 in normal rat astrocytes. Radiation Research. 1995, 143:1-7.
27.Subramaniam, M. et al: Identification of a novel TGF-b-regulated gene encoding a putative zinc finger protein in human osteoblasts. Nucleic Acids Res. 1995, 23:4907-12.
30.Zhu, Y. et al: DUB-1, a deubiquitinating enzyme with growth suppressing activity. Proc. Natl. Acad. Sci. USA. 1996, 93:3275-79.
44.Wang, X. et al: Interferon-inducible protein-10 involves vascular smooth muscle cell migration, proliferation, and inflammatory response. J. Biol. Chem. 1996, 271:24286-24293.
46.Taylor, G.A. et al: Identification of a novel GTPase, the inducibly expressed GTPase, that accumulates in response to interferon [gamma]. J. Biol. Chem. 1996, 271:20399-20405.
59.Robinson, L. et al: ETS target genes: Identification of Egr1 as a target by RNA differential display and whole genome PCR techniques. Proc. Natl. Acad. Sci. USA. 1997, 94:7170-7175.
61.Pendurthi, U.R. et al: Binding of factor VIIa to tissue factor induces alterations in gene expression in human fibroblast cells: up-regulation of poly(A) polymerase. Proc. Natl. Acad. Sci. USA. 1997, 94:12598-12603.
63.Bartl, S. et al.: Identification of mouse histone deacetylase 1 as a growth factor-inducible gene. Mol. Cell. Biol. 1997, 17:5033-43.
78.Kothapalli, R. et al: Detection of ebaf, a novel human gene of the transforming growth factor b superfamily: Association of gene expression with endometrial bleeding. J. Clin. Invest. 1997, 99:2342-2350.
91.Padanilam, B.J. and Hammerman, M.R.: Ischemia-induced receptor for activated C kinase (RACK1) expression in rat kidneys. Am. J. Physiol: Renal Physiology. 1997, 272:F160-166.
106.Chacko, G. et al: Induction of acute translational response genes by homocysteine: Elongation factors-1-µ, -b, -d. J. Biol. Chem. 1998, 273:19840-19846.
108.Du, M. et al: Cloning and expression analysis of a novel salicylate suppressible gene, Hs-CUL-3, a member of cullin/Cdc53 family. J. Biol. Chem. 1998, 273:24289-24292.
110.Zentner, M.D. et al: The amiloride-sensitive epithelial sodium channel a-subunit is transcriptionally down-regulated in rat parotid cells by the extracellular signal-regulated protein kinase pathway. J. Biol. Chem. 1998, 273:30770-30776.
111.Austin, R.C. et al: Homocysteine-dependent alterations in mitochondrial gene expression, function and structure: Homocysteine and H2O2 act synergistically to enhance mitochondrial damage. J. Biol. Chem. 1998, 273:30808-30817.
115.Chung, K.-C. et al: Raf and fibroblast growth factor phosphorylate Elk1 and activate the serum response element of the immediate early gene pip92 by mitogen-activated protein kinase-independent as well as -dependent signaling pathways. Mol. Cell. Biol. 1998, 18:2272-2281.
242.Taylor, G.A. et al: Regulation of P311 expression by Met-hepatocyte growth factor/scatter factor and the ubiquitin/proteasome system. J. Biol. Chem. 2000, 275:4215-4219.
244.Hu, Q. and Maity, S.N.: Stable expression of a dominant negative mutant of CCAAT binding factor/NF-Y in mouse fibroblast cells resulting in retardation of cell growth and inhibition of transcription of various cellular genes. J. Biol. Chem. 2000, 275:4435-4444.
250.Zhang, R. et al: Identification of a novel ligand-receptor pair constitutively activated by Ras oncogenes. J. Biol. Chem. 2000, 275:24436-24443.
278.Moriwaki, Y. et al: Mycobacterium bovis Bacillus calmette-guerin and its cell wall complex induce a novel lysosomal membrane protein, SIMPLE, that bridges the missing link between lipopolysaccharide and p53-inducible Gene, LITAF(PIG7), and estrogen-inducible gene, EET-1. J. Biol. Chem. 2001, 276:23065-23076.
283.Poligone, B. and Baldwin, A.S.: Positive and negative regulation of NF-kB by COX-2. Roles of different prostaglandins. J. Biol. Chem. 2001, 276:38658-38664.
290.Jhaveri, M.S. et al: Impact of extracellular folate levels on global gene expression. Mol. Pharmacology. 2001, 60:1288-1295.
313.Yamada, T. et al: Lineage switch induced by overexpression of Ets family transcription factor PU.1 in murine erythroleukemia cells. Blood. 2001, 97:2300-2307.
315.Thai, S. et al: Detection of early gene expression changes by differential display in the livers of mice exposed to dichloroacetic acid. Carcinogenesis. 2001, 22:1317-1322.
318.Doi, M. et al: Light-induced phase-delay of the chicken pineal circadian clock is associated with the induction of cE4bp4, a potential transcriptional repressor of cPer2 gene. Proc. Natl. Acad. Sci. USA. 2001, 98:8089-8094.
324.Kretzler, M. et al: Integrin linked kinase as a candidate downstream effector in proteinuria. FASEB J. 2001, 10.1096/fj.00-0832fje.
342.Rousseau, S. et al: Inhibition of SAPK2a/p38 prevents hnRNP A0 phosphorylation by MAPKAP-K2 and its interaction with cytokine mRNAs. EMBO J. 2002, 21:6505-6514.
343.Jiao, X. et al: Identification of target messenger RNA substrates for the murine deleted in azoospermia-like RNA-binding protein. Biol. Reproduction. 2002, 66:475-485.
348.Wolf, G. et al: Angiotensin IIŐs antiproliferative effects mediated through AT2-receptors depend on down-regulation of SM-20. Laboratory Investigation. 2002, 82:1305-1317.
350.Wang, M. et al: Interleukin 24 (MDA-7/MOB-5) signals through two heterodimeric receptors, IL-22R1/IL-20R2 and IL-20R1/IL-20R2. J. Biol. Chem. 2002, 277:7341-7347.
352.Christian, M. et al: Cyclic AMP-induced forkhead transcription factor, FKHR, cooperates with CCAAT/enhancer-binding protein b in differentiating human endometrial stromal cells. J. Biol. Chem. 2002, 277:20825-20832.
354.Cunningham, S.A. et al: JAM2 interacts with a4b1, facilitation by JAM3. J. Biol. Chem. 2002, 277:27589-27592.
356.McCudden, C.R. et al: Characterization of mammalian stanniocalcin receptors. Mitochondrial targeting of ligand and receptor for regulation of cellular metabolism. J. Biol. Chem. 2002, 277:45249-45258.
368.Giraudier, S. et al: Overexpression of FKBP51 in idiopathic myelofibrosis regulates the growth factor independence of megakaryocyte progenitors. Blood. 2002, 100:2932-2940.
395.Lefebvre, B. et al: Chromosomal integration of retinoic acid response elements prevents cooperative transcriptional activation by retinoic acid receptor and retinoid x receptor. Mol. Cell. Biol. 2002, 22:1446-1459.
401.Matsuoka, T. et al: Members of the large maf transcription family regulate insulin gene transcription in islet § cells. Mol. Cell. Biol. 2003, 23:6049-6062.
423.Satake, H. et al: Genes modulated by expression of GD3 synthase in Chinese hamster ovary cells, evidence that the Tis21 gene is now involved in the induction of GD3 9-0-acetylation. J. Biol. Chem. 2003, 278:7942-7948.
428.P‡ez-Pereda, M. et al: Involvement of bone morphogenetic protein 4 (BMP-4) in pituitary prolactinoma pathogenesis through a Smad/estrogen receptor crosstalk. Proc. Natl. Acad. Sci. USA. 2003, 100:1034-1039.
437.Luo, Y. et al: Development of Nurr1 stable cell lines for the identification of downstream targets. Ann. N.Y. Acad. Sci. 2003, 991:354-358.
444.Dong, G. et al: Metastatic squamous cell carcinoma cells that overexpress c-Met exhibit enhanced angiogenesis factor expression, scattering and metastasis in response to hepatocyte growth factor. Oncogene. 2004, 23:6199-6208.
462.Coupel, S. et al: RhoA activation mediates phosphatidylinositol 3-kinaseĐdependent proliferation of human vascular endothelial cells: An alloimmune mechanism of chronic allograft nephropathy. J. Am. Soc. Nephrology. 2004, 15:2429-2439.
475.Bardeesy, N. et al: Role of epidermal growth factor receptor signaling in RAS-driven melanoma. Mol. Cell. Biol. 2005, 25:4176-4188.
488.Trevaskis, J. et al: Src Homology 3-domain growth factor receptor-bound 2-like (endophilin) interacting protein 1, a novel neuronal protein that regulates energy balance. Endocrinology. 2005, 146:3757-3764.
492.Tang, D.C. et al: The hydroxyurea-induced small GTP-binding protein SAR modulates gamma-globin gene expression in human erythroid cells. Blood. 2005, 106:3256-3263.

Immunology and Cytokine Actions

51.Sheikh-Hamad, D. et al: CD9 antigen mRNA is induced by hypertonicity in two renal epithelial cell lines. Am. J. Physiol: Cell Physiology. 1996, 270:C253-258.
52.Jin, F. et al: Secretory leukocyte protease inhibitor: a macrophage product induced by and antagonistic to bacterial lipopolysaccharide. Cell. 1997, 88:417-26.
64.Kuno, K. et al: Molecular cloning of a gene encoding a new type of metalloproteinase-disintegrin family protein with thrombospondin motifs as an inflammation associated gene. J. Biol. Chem. 1997, 272:556-562.
67.Dong, L. et al: Down-regulation of major histocompatibility complex Q1b gene expression by 2,3,7,8-tetrachlorodibenzo-p-dioxin. J. Biol. Chem. 1997, 272:29614-29619.
76.Yamada, E. et al: Differential display analysis of murine collagen-induced arthritis: cloning of the cDNA-encoding murine ATPase inhibitor. Immunology. 1997, 92:571-576.
79.Li. Y. and Youssoufian, H.: MxA overexpression reveals a com-mon genetic link in four Fanconi anemia complementation groups. J. Clin. Invest. 1997, 100:2873-2880.
102.Dandoy-Dron, F. et al: Gene expression in Scrapie. Cloning of a new Scrapie-responsive gene and the identification of increased levels of seven other mRNA transcripts. J. Biol. Chem. 1998, 273:7691-7697.
109.Badea, T.C. et al: Molecular cloning and characterization of RGC-32, a novel gene induced by complement activation in oligodendrocytes. J. Biol. Chem. 1998, 273:26977-26981.
127.Sun, H.B. et al: MRG1, the product of a melanocyte-specific gene related gene, is a cytokine-inducible transcription factor with transformation activity. Proc. Natl. Acad. Sci. USA. 1998, 95:13555-13560.
133.Morikawa, Y. et al: Induction of synaptosomal-associated protein-23 kD (SNAP-23) by various cytokines. Blood. 1998, 92:129-135.
134.Xu, D. et al: Selective expression of a stable cell surface molecule on type 2 but not type 1 helper T cells. J. Experimental Medicine. 1998, 187:787-794.
138.Chen, J. et al: Eotaxin and capping protein in experimental vasculopathy. American Journal of Pathology. 1998, 153:81-90.
141.Li, X.-L. et al: RNase L mediates the antiviral effect of interferon through a selective reduction in viral RNA during Encephalomyocarditis virus infection. J. Virology. 1998, 72:2752-2759.
189.Ahlers, C. et al: Cyclosporin A inhibits Ca2+-mediated upregulation of the DNA repair enzyme DNA polymerase b in human peripheral blood mononuclear cells. European J. Biochem. 1999, 264:952-959.
205.Qiu F.-H. et al: IMP and AMP deaminase in reperfusion injury down-regulates neutrophil recruitment. Proc. Natl. Acad. Sci. USA. 2000, 97:4267-4272.
225.Tang, X. et al: Down-regulation of GATA-2 transcription during Pneumocystis carinii infection. Infection and Immunity. 2000, 68:4720-4724.
245.Li, X.-L. et al: RNase-L-dependent destabilization of interferon-induced mRNAs - A role for the 2-5A system in attenuation of the interferon response. J. Biol. Chem. 2000, 275:8880-8888.
262.Attur, M.G. et al: Functional genomic analysis in arthritis-affected cartilage: yin-yang regulation of inflammatory mediators by a5§1 and aV§3 integrins. J. Immunolgy. 2000, 164:2684-2691.
279.Huang, W. et al: The nucleolar phosphoprotein B23 interacts with hepatitis delta antigens and modulates the hepatitis delta virus RNA replication. J. Biol. Chem. 2001, 276:25166-25175.
283.Poligone, B. and Baldwin, A.S.: Positive and negative regulation of NF-kB by COX-2. Roles of different prostaglandins. J. Biol. Chem. 2001, 276:38658-38664.
310.Guenzi, E. et al: The helical domain of GBP-1 mediates the inhibition of endothelial cell proliferation by inflammatory cytokines. EMBO J. 2001, 20:5568-5577.
311.Lacy, H.M. and Sanderson, R.D.: Sperm protein 17 is expressed on normal and malignant lymphocytes and promotes heparan sulfate-mediated cell-cell adhesion. Blood. 2001, 98:2160-2165.
312.Gregorio-King, C.C. et al: ORP-3, a human oxysterol-binding protein gene differentially expressed in hematopoietic cells. Blood. 2001, 98:2279-2281.
330.Boulday, G. et al: Antigraft antibody-mediated expression of metalloproteinases on endothelial cells : differential expression of TIMP-1 and ADAM-10 depends on antibody specificity and isotype. Circulation Research. 2001, 88:430-437.
342.Rousseau, S. et al: Inhibition of SAPK2a/p38 prevents hnRNP A0 phosphorylation by MAPKAP-K2 and its interaction with cytokine mRNAs. EMBO J. 2002, 21:6505-6514.
350.Wang, M. et al: Interleukin 24 (MDA-7/MOB-5) signals through two heterodimeric receptors, IL-22R1/IL-20R2 and IL-20R1/IL-20R2. J. Biol. Chem. 2002, 277:7341-7347.
363.GutiŽrrez-Pabello, J.A. et al: Upregulation of Thymosin §-10 by Mycobacterium bovis infection of bovine macrophages is associated with apoptosis. Infection and Immunity. 2002, 70:2121-2127.
364.Sebert, M.E. et al: Microarray-based identification of htrA, a Streptococcus pneumoniae gene that is regulated by the CiaRH two-component system and contributes to nasopharyngeal colonization. Infection and Immunity. 2002, 70:4059-4067.
365.Swords, W.E. et al: Acylation of the lipooligosaccharide of haemophilus influenzae and colonization: an htrB mutation diminishes the colonization of human airway epithelial cells. Infection and Immunity. 2002, 70:4661-4668.
366.Rude, T.H. et al: Relationship of the glyoxylate pathway to the pathogenesis of Cryptococcus neoformans. Infection and Immunity. 2002; 70:5684-5694.
381.Walder, K. et al: Tanis: a link between type 2 diabetes and inflammation? Diabetes. 2002, 51:1859-1866.
388.Richard, M. et al: The expression pattern of the ITIM-bearing lectin CLECSF6 in neutrophils suggests a key role in the control of inflammation. J. Leukoc. Biol. 2002, 71:871-880.
405.Warke, R.V. et al: Dengue virus induces novel changes in gene expression of human umbilical vein endothelial cells. J. Virology. 2003, 77:11822-11832.
411.Luberto, C. et al: Identification of App1 as a regulator of phagocytosis and virulence of Cryptococcus neoformans. J. Clin. Invest. 2003, 112:1080-1094.
435.El-Gedaily, A. et al: Constitutive and regulated expression of platelet basic protein in human monocytes. J. Leukoc. Biol. 2003, 10.1189-jlb.0603288.
436.Tran, H. et al: Modulation of the LDL receptor and LRP levels by HIV protease inhibitors. J. Lipid Research. 2003, 44:1859-1869.
442.Tam, S.-Y. et al: RabGEF1 is a negative regulator of mast cell activation and skin inflammation. Nature Immunology. 2004, 5:844-852.
454.Begum, N.A. et al: Mycobacterium bovis BCG cell wall-specific differentially expressed genes identified by differential display and cDNA subtraction in human macrophages. Infection and Immunity. 2004, 72:937-948.
463.Reiser, J. et al: Induction of B7-1 in podocytes is associated with nephrotic syndrome. J. Clin. Invest. 2004, 113:1390-1397.
464.Carlson, K.A. et al: Molecular characterization of a putative antiretroviral transcriptional factor, OTK18. J. Immunology. 2004, 172:381-391.
490.Lamerant, N. and Kieda, C.: Adhesion properties of adhesion-regulating molecule 1 protein on endothelial cells. FEBS J. 2005, 272:1833-1844.
503.Schnell, S. et al: Gimap4 accelerates T-cell death. Blood. 2006, 108:591-599.

Endocrine Biology and Hormone Actions

40.Averboukh, L. et al: Regulation of S100P expression by androgen. The Prostate. 1996, 29:350-55.
56.Montano, M.M. and Katzenellenbogen, B.S.: The quinone reductase gene: a unique estrogen receptor-regulated gene that is activated by antiestrogens. Proc. Natl. Acad. Sci. USA. 1997, 94:2581-2586.
57.Lin, T.-M. and Chang, C.: Cloning and characterization of TDD5, an androgen target gene that is differentially repressed by testosterone and dihydrotestosterone. Proc. Natl. Acad. Sci. USA. 1997, 94:4988-4993.
71.Everett L.M. et al: A novel estrogen-enhanced transcript identified in the rat uterus by differential display. Endocrinology. 1997, 138:3836-3841.
95.Garnier, M. et al: Identification of estrogen-responsive genes in neuroblastoma SK-ER3 cells. Journal of Neuroscience. 1997, 17:4591-4599.
100.Kemppainen, R.J. and Behrend, E.N.: Dexamethasone rapidly induces a novel Ras superfamily member-related gene in AtT-20 cells. J. Biol. Chem. 1998, 273:3129-3131.
107.Tabor, D.E. et al: Transcriptional activation of the Stearoyl-CoA desaturase 2 gene by sterol regulatory element-binding protein/adipocyte determination and differentiation Factor 1. J. Biol. Chem. 1998, 273:22052-22058.
120.Fang, Z. et al: Identification of novel factors that regulate GnRH gene expression and neuronal migration. Endocrinology. 1998, 39:3654-3657.
143.Matsuba, T. et al: Identification of glucocorticoid- and adenovirus E1A-regulated genes in lung epithelial cells by differential display. American J. Respiratory Cell & Mol. Biol. 1998, 18:243-254.
144.Chen, J. et al: Enhanced levels of several mitochondrial mRNA transcripts and mitochondrial superoxide production during ethinyl estradiol-induced hepatocarcinogenesis and after estrogen treatment of HepG2 cells. Carcinogenesis. 1998, 19:2187-2193.
157.Chen, D. et al: Cloning and uterus/oviduct-specific expression of a novel estrogen-regulated gene (ERG1). J. Biol. Chem. 1999, 274:32215-32224.
159.Dieudonne, S.C. et al: Differential display of human marrow stromal cells reveals unique mRNA expression patterns in response to dexamethasone. J. Cellular Biochemistry. 1999, 76:231-243.
177.Krebs, C.J. et al: The 70-kDa heat shock cognate protein (Hsc73) gene is enhanced by ovarian hormones in the ventromedial hypothalamus. Proc. Natl. Acad. Sci. USA. 1999, 96:1686-1691.
195.Chen, D. et al: Potential regulation of membrane trafficking by estrogen receptor via induction of Rab11 in uterine glands during implantation. Mol. Endocrinology. 1999, 13:993-1004.
206.Krebs, C.J. et al: A membrane-associated progesterone-binding protein, 25-Dx, is regulated by progesterone in brain regions involved in female reproductive behaviors. Proc. Natl. Acad. Sci. USA. 2000, 97:12816-12821.
214.Espey, L.L. et al: Induction of early growth response protein-1 gene expression in the rat ovary in response to an ovulatory dose of human chorionic gonadotropin. Endocrinology. 2000, 141:2385-2391.
215.Yoshioka, S. et al: Expression of tumor necrosis factor-stimulated gene-6 in the rat ovary in response to an ovulatory dose of gonadotropin. Endocrinology. 2000, 41:4114-4119.
216.Espey, L.L. et al: Characterization of ovarian carbonyl reductase gene expression during ovulation in the gonadotropin-primed immature rat. Biol. Reproduction. 2000, 62:390-397.
218.Espey, L.L. et al: Ovarian expression of a disintegrin and metalloproteinase with thrombospondin motifs during ovulation in the gonadotropin-primed immature rat. Biol. Reproduction. 2000, 62:1090-1095.
219.Ujioka, T. et al: Expression of regulator of G-protein signaling protein-2 in the rat ovary at the time of ovulation. Biol. Reproduction. 2000, 63:1513-1517.
224.Chinoy, M.R. et al: Dexamethasone enhances ras-recision gene expression in cultured murine fetal lungs: role in development. Am. J. Physiol: Lung Cell. & Molec. Physiol. 2000, 279:312L-318L.
232.Dowling, A.L.S. et al: Acute changes in maternal thyroid hormone induce rapid and transient changes in gene expression in fetal rat brain. Journal of Neuroscience. 2000, 20:2255-2265
273.Eisenhofer, G. et al: Pheochromocytomas in von Hippel-Lindau Syndrome and multiple endocrine neoplasia type 2 display distinct biochemical and clinical phenotypes. J. Clin. Endocrinology & Metabolism. 2001, 86:1999-2008.
274.Kumar, S. et al: Messenger ribonucleic acid encoding interferon-inducible guanylate binding protein 1 is induced in human endometrium within the putative window of implantation. J. Clin. Endocrinology & Metabolism. 2001, 86:2420-2427
319.Harris, H.A. et al: Regulation of metallothionein II messenger ribonucleic acid measures exogenous estrogen receptor-§ activity in SAOS-2 and LNCaPLN3 cells. Endocrinology. 2001, 142:645-652.
320.Huynh, H. et al: Induction of UO-44 gene expression by tamoxifen in the rat uterus and ovary. Endocrinology. 2001, 142:2985-2995.
321.Huynh, H. et al: Cloning and characterization of a novel pregnancy-induced growth inhibitor in mammary gland. Endocrinology. 2001, 142:3607-3615
322.Espey, L.L. et al: 3-Hydroxysteroid dehydrogenase messenger RNA transcription in the immature rat ovary in response to an ovulatory dose of gonadotropin. Biol. Reproduction. 2001;65:72-78.
323.Edgar, A.J. et al: Cloning of dexamethasone-induced transcript : a novel glucocorticoid-induced gene that is upregulated in emphysema. Am. J. Respiratory Cell Molecular Biology. 2001, 25:119-124.
326.Bobe, J. and Goetz, F.W.: An ovarian progastricsin is present in the trout coelomic fluid after ovulation. Biol. Reproduction. 2001, 64:1048-1055.
345.Baran, N. et al: Characterization of a prolactin-regulated gene in reproductive tissues using the prolactin receptor knockout mouse model. Biol. Reproduction. 2002, 66:1210-1218.
347.Espey, L.L. and Richards, J.S.: Temporal and spatial patterns of ovarian gene transcription following an ovulatory dose of gonadotropin in the rat. Biol. Reproduction. 2002, 67:1662-1670.
357.Mong, J.A. et al: Perspective: micoarrays and differential display PCRŃtools for studying transcript levels of genes in neuroendocrine systems. Endocrinology. 2002, 143:2002-2006.
386.Ahola, T.M. et al: Progestin upregulates G-protein-coupled receptor 30 in breast cancer cells. European J. Biochem. 2002, 269:2485-2490.
401.Matsuoka, T. et al: Members of the large maf transcription family regulate insulin gene transcription in islet § cells. Mol. Cell. Biol. 2003, 23:6049-6062.
404.Bogatcheva, N.V. et al: GREAT/LGR8 is the only receptor for insulin-like 3 peptide. Mol. Endocrinology. 2003, 17:2639-2646.
408.Okulicz, W.C. and Ace, C.I.: Temporal regulation of gene expression during the expected window of receptivity in the rhesus monkey endometrium. Biol. Reproduction. 2003, 69:1593-1599.
409.Baran, N. et al: Decysin, a new member of the metalloproteinase family, is regulated by prolactin and dteroids during mouse pregnancy. Biol. Reproduction. 2003, 68:1787-1792.
410.Espey, L.L. et al: Cells of the rat ovary during the periovulatory period. Biol. Reproduction. 2003, 68:1895-1902.
428.P‡ez-Pereda, M. et al: Involvement of bone morphogenetic protein 4 (BMP-4) in pituitary prolactinoma pathogenesis through a Smad/estrogen receptor crosstalk. Proc. Natl. Acad. Sci. USA. 2003, 100:1034-1039.
440.Scobey, M.J. et al: The Id2 transcriptional repressor is induced by follicle-stihormone and cAMP. J. Biol. Chem. 2004, 279:16064 - 16070.
474.Jacques, C. et al: Two-step differential expression analysis reveals a new set of genes involved in thyroid oncocytic tumors. J. Clin. Endocrinology & Metabolism. 2005, 90:2314-2320.
486.Mutsuga, N. et al: Regulation of gene expression in magnocellular neurons in rat supraoptic nucleus during sustained hypoosmolality. Endocrinology. 2005, 146:1254-1267.
487.Hung, H.: Suppression of ps20 expression in the rat uterus by tamoxifen and estrogens. Endocrinology. 2005, 146:2388-2396.
488.Trevaskis, J. et al: Src Homology 3-domain growth factor receptor-bound 2-like (endophilin) interacting protein 1, a novel neuronal protein that regulates energy balance. Endocrinology. 2005, 146:3757-3764.
489.Paredes, A. et al: Loss of synaptonemal complex protein-1, a synaptonemal complex protein, contributes to the initiation of follicular assembly in the developing rat ovary. Endocrinology. 2005, 146:5267-5277.

Neuroscience

19.Douglass et al: PCR differential display identifies a rat brain mRNA that is transcriptionally regulated by cocaine and amphetamine. J. Neurosciences. 1995, 15:2471-81.
42.Green, C.B. et al: Use of a high stringency differential display screen for identification of retinal mRNAs that are regulated by a circadian clock. Molecular Brain Research. 1996, 37:157-65.
43.Green, C.B. et al: Identification of a novel vertebrate circadian clock-regulated gene encoding the protein nocturnin. Proc. Natl. Acad. Sci. USA. 1996, 93:14884-88.
49.Crino, P.B. and Eberwine, J.: Molecular characterization of the dendritic growth cone: regulated mRNA transport and local protein synthesis. Neuron. 1996, 17:1173-1187.
65.Conti, B. et al: Induction of interferon-[gamma] inducing factor in the adrenal cortex. J. Biol. Chem. 1997, 272:2035-2037.
70.Flanigan, T.P. and Leslie R.A.: Changes in brain gene expression in psychiatric illnessŃmRNA differential display provides some clues. Molecular Psychiatry. 1997, 2:451-456.
73.Livesey, F.J. et al: A Schwann cell mitogene accompanying regeneration of motor neurons. Nature. 1997, 390:614-618.
80.Tohda, C. et al: Increased expression of mRNA for myocyte-specific enhancer binding factor (MEF) 2C in the cerebral cortex of the itching mouse. Neuroscience Research. 1997, 29:209-215.
89.Liu, Q.-R. et al: A developmental gene (Tolloid/BMP-1) is regulated in Aplysia neurons by treatments that induce long-term sensitization. Journal of Neuroscience. 1997, 17:755-764.
95.Garnier, M. et al: Identification of estrogen-responsive genes in neuroblastoma SK-ER3 cells. Journal of Neuroscience. 1997, 17:4591-4599.
98.Lawlor, E.R. et al: The Ewing tumor family of peripheral primitive neuroectodermal tumors expresses human gastrin-releasing peptide. Cancer Research. 1998, 58:2469-2476.
102.Dandoy-Dron, F. et al: Gene expression in Scrapie. Cloning of a new Scrapie-responsive gene and the identification of increased levels of seven other mRNA transcripts. J. Biol. Chem. 1998, 273:7691-7697.
109.Badea, T.C. et al: Molecular cloning and characterization of RGC-32, a novel gene induced by complement activation in oligodendrocytes. J. Biol. Chem. 1998, 273:26977-26981.
118.Nagano, T. et al: Differentially expressed olfactomedin-related glycoproteins (pancortins) in the brain. Molecular Brain Research. 1998, 53:13-23.
119.Wang, X.B. and Uhl, G.R.: Subtracted differential display - genes with amphetamine-altered expression patterns include calcineurin. Molecular Brain Research. 1998, 53:344-347.
120.Fang, Z. et al: Identification of novel factors that regulate GnRH gene expression and neuronal migration. Endocrinology. 1998, 39:3654-3657.
147.Krushel, L.A. et al: NF-KB activity is induced by neural cell adhesion molecule binding to neurons and astrocytes. J. Biol. Chem. 1999, 274:2432-2439.
158.Akiyama, H. et al: Molecular cloning and biological activity of a novel Ha-Ras suppressor gene predominantly expressed in skeletal muscle, heart, brain, and bone marrow by differential display using clonal mouse EC cells, ATDC5. J. Biol. Chem. 1999, 274:32192-32197.
172.OŐHara, B.F. et al: Gene expression in the brain across the hibernation cycle. Journal of Neuroscience. 1999, 19:3781-3790.
173.Gomi, H. et al: Learning induces a CDC2-related protein kinase, KKIAMRE. Journal of Neuroscience. 1999, 19:9530-9537.
182.Wang, J.-F. et al: Differential display PCR reveals novel targets for the mood-stabilizing drug valproate including the molecular chaperone GRP78. Mol. Pharmacology. 1999, 55:521-527.
191.Liu, H. et al: Isolation of 10 differentially expressed cDNAs in differentiated Neuro2a cells induced through controlled expression of the GD3 synthase gene. J. Neurochemistry. 1999, 72:1781-1790.
192.Gomes, I. et al: A proline- and glutamine-rich protein promotes apoptosis in neuronal cells. J. Neurochemistry. 1999, 73:612-622.
196.Chen, G. et al: The mood-stabilizing agents lithium and valproate robustlIncrease the levels of the neuroprotective protein bcl-2 in the CNS. J. Neurochemistry. 1999, 72:879-882.
206.Krebs, C.J. et al: A membrane-associated progesterone-binding protein, 25-Dx, is regulated by progesterone in brain regions involved in female reproductive behaviors. Proc. Natl. Acad. Sci. USA. 2000, 97:12816-12821.
209.Chan, J.R. et al: Progesterone synthesized by Schwann cells during myelin formation regulates neuronal gene expression. Mol. Biol. of the Cell. 2000, 11:2283-2295.
230.Fujii, S. et al: Differential expression of neuroendocrine-specific protein in form-deprived chick eyes. Invest. Ophthalmology & Vis. Sci. 2000, 41:1533-1541.
231.Feldkaemper, M.P. et al: Changes in retinal and choroidal gene expression during development of refractive errors in chicks. Invest. Ophthalmology & Vis. Sci. 2000, 41:1623-1628.
232.Dowling, A.L.S. et al: Acute changes in maternal thyroid hormone induce rapid and transient changes in gene expression in fetal rat brain. Journal of Neuroscience. 2000, 20:2255-2265
238.Denisenko-Nehrbass, N.I. et al: Site-specific retinoic acid production in the brain of adult songbirds. Neuron. 2000, 27:359-370.
242.Taylor, G.A. et al: Regulation of P311 expression by Met-hepatocyte growth factor/scatter factor and the ubiquitin/proteasome system. J. Biol. Chem. 2000, 275:4215-4219.
275.DeGregorio-Rocasolano, N. et al: Overexpression of neuronal pentraxin 1 is involved in neuronal death evoked by low K+ in cerebellar granule cells. J. Biol. Chem. 2001, 276:796-803.
291.Sahir, N. et al: Caffeine-induced telencephalic vesicle evagination in early post-implantation mouse embryos involves cAMP-dependent protein kinase (PKA) inhibition. Cerebral Cortex. 2001, 11:343-349.
301.Thakker-Varia, S. et al: Rab3A is required for brain-derived neurotrophic factor-induced synaptic plasticity: transcriptional analysis at the population and single-cell levels. J. Neurosciences. 2001, 21:6782-6790.
318.Doi, M. et al: Light-induced phase-delay of the chicken pineal circadian clock is associated with the induction of cE4bp4, a potential transcriptional repressor of cPer2 gene. Proc. Natl. Acad. Sci. USA. 2001, 98:8089-8094.
331.Watakabe, A. et al: Growth/differentiation factor 7 is preferentially expressed in the primary motor area of the monkey neocortex. J. Neurochemistry. 2001, 76:1455-1464.
332.Sumi, S. et al: Isolation and characterization of the genes up-regulated in isolated neurons by aged garlic extract (AGE). J. Nutrition. 2001, 131:1096S-1099.
357.Mong, J.A. et al: Perspective: micoarrays and differential display PCRŃtools for studying transcript levels of genes in neuroendocrine systems. Endocrinology. 2002, 143:2002-2006.
362.Yang, C.B. et al: Identification of Munc13-3 as a candidate gene for critical-period neuroplasticity in visual cortex. J. Neurosciences. 2002, 22:8614-8618.
371.Yoshida-Hiroi, M. et al: Chromaffin cell function and structure is impaired in corticotropin-releasing hormone receptor type 1-null mice. Molecular Psychiatry. 2002, 7:967-974.
380.Hong, J. et al: Characterization of a cysteine proteinase inhibitor induced during neuronal cell differentiation. J. Neurochem. 2002, 81:922-934.
392.Tsai, K.J. et al: sgk, a primary glucocorticoid-induced gene, facilitates memory consolidation of spatial learning in rats. Proc. Natl. Acad. Sci. USA. 2002, 99:3990-3995.
430.Kajimoto, Y. et al: Synapse-associated protein 90/postsynaptic density-95-associated protein (SAPAP) is expressed differentially in phencyclidine-treated rats and is increased in the nucleus accumbens of patients with schizophrenia. Neuropsychopharmacology. 2003, 28:1831-1839.
438.Beyer, C. et al: Regulation of gene expression in the developing midbrain by estrogen: implication of classical and nonclassical steroid signaling. Ann. N.Y. Acad. Sci. 2003, 1007:17-28.
449.Mori, M. et al: Expression of apoptosis inhibitor protein Mcl1 linked to neuroprotection in CNS neurons. Cell Death and Differentiation. 2004, 11:1223-1233.
453.Shelton, R.C. et al: Differential expression of Pentraxin 3 in fibroblasts from patients with major depression. Neuropsychopharmacology. 2004, 29:126-132.
455.Brinks, H. et al: The repulsive guidance molecule RGMa is involved in the formation of afferent connections in the dentate gyrus. Journal of Neuroscience. 2004, 24:3862-3869.
456.Sokolowski, B.H.A. et al: Identification and localization of an arachidonic acid-sensitive potassium channel in the cochlea. Journal of Neuroscience. 2004, 24:6265-6276.
457.de Yebra L. et al: Reduced KIAA0471 mRNA expression in Alzheimer's patients: a new candidate gene product linked to the disease? Hum. Mol. Genet. 2004, 13:2607-2612.
458.Huang, H. et al: Downregulation of ATP synthase subunit-6, cytochrome c oxidase-III, and NADH dehydrogenase-3 by bright cyclic light in the rat retina. Invest. Ophthalmology & Vis. Sci. 2004, 45:2489-2496.
481.Komatsu, Y. et al: Retinol-binding protein gene is highly expressed in higher-order association areas of the primate neocortex. Cerebral Cortex. 2005, 15:96-108.
482.Panepinto, J. et al: The DEAD-box RNA helicase Vad1 regulates multiple virulence-associated genes in Cryptococcus neoformans. J. Clin. Invest. 2005, 115:632-641.
486.Mutsuga, N. et al: Regulation of gene expression in magnocellular neurons in rat supraoptic nucleus during sustained hypoosmolality. Endocrinology. 2005, 146:1254-1267.
488.Trevaskis, J. et al: Src Homology 3-domain growth factor receptor-bound 2-like (endophilin) interacting protein 1, a novel neuronal protein that regulates energy balance. Endocrinology. 2005, 146:3757-3764.
502.Wang, S.-Z. et al: An oligodendrocyte-specific zinc-finger transcription regulator cooperates with Olig2 to promote oligodendrocyte differentiation. Development. 2006, 133:3389-3398.

Skin Diseases and Wound healing

48.Miyazaki, T. et al: Molecular cloning of a novel thyroid hormone-responsive gene, ZAKI-4, in human skin fibroblasts. J. Biol. Chem. 1996, 271:14567-14571.
90.Rivas, M.V. et al: Identification of aberrantly regulated genes in diseased skin using the cDNA differential display technique. J. Invest. Dermatology. 1997, 108:188-194.
125.Furumura, M. et al: Characterization of genes modulated during pheomelanognesis using differential display. Proc. Natl. Acad. Sci. USA. 1998, 95:7374-7378.
136.Ross, R. et al: Maturation of epidermal Langerhans cells in vitro is accompanied by down regulation of 4F2 (CD98) as determined by differential display. J. Invest. Dermatology. 1998, 110:57-61.
137.Takaishi, M. et al: Isolation and characterization of a putative keratin-associated protein gene expressed in embryonic skin of mice. J. Invest. Dermatology. 1998, 111:1009-1020.
190.Le Poole, I.C. et al: Altered gene expression in melanocytes exposed to 4-tertiary butyl phenol (4-TBP): upregulation of the A2b adenosine receptor. J. Invest. Dermatology. 1999, 113:725-731.
198.Soo, C. et al: Cutaneous rat wounds express c49a, a novel gene with homology to the human melanoma differentiation associated gene, mda-7. J. Cellular Biochemistry. 1999, 74:1-10.
240.Darden, D.L. et al: RNA differential display of scarless wound healing in fetal rabbit indicates downregulation of a CCT chaperonin subunit and upregulation of a glycophorin-like gene transcript. J. Pediatric Surgery. 2000, 35:406-419.
241.Li, H.S. et al: Prostaglandin EP4 receptor mRNA is overexpressed in fetal rabbit skin wound. Archives of Otolaryngology-Head and Neck Surgery. 2000, 126:1337-1343.
280.Spradling, K.D. et al: Epsin 3 is a novel extracellular matrix-induced transcript specific to wounded epithelia. J. Biol. Chem. 2001, 276:29257-29267.
286.Makino, T. et al: Hornerin, a novel profilaggrin-like protein and differentiation-specific marker isolated from mouse skin. J. Biol. Chem. 2001, 276:47445-47452.
373.Hell-Pourmojib, M. et al: Differential expression of a novel gene in response to hsp27 and cell differentiation in human keratinocytes. J. Invest. Dermatology. 2002, 119:154-159.
374.Cancino-D’az, J.C. et al: Interleukin-13 receptor in psoriatic keratinocytes: overexpression of the mRNA and underexpression of the protein. J. Invest. Dermatology. 2002, 119:1114-1120.
375.Sachidanandan, C. et al: Tristetraprolin and LPS-inducible CXC chemokine are rapidly induced in presumptive satellite cells in response to skeletal muscle injury. J. Cell Science. 2002, 115:2701-2712.
391.Sukotjo, C. et al: Molecular cloning of Wound Inducible Transcript (wit 3.0) differentially expressed in edentulous oral mucosa undergoing tooth extraction wound-healing. J. Dental Research. 2002, 81:229-235.
419.Mirmohammadsadegh, A. et al: HAX-1, identified by differential display reverse transcription polymerase chain reaction, is overexpressed in lesional psoriasis. J. Invest. Dermatology. 2003, 120:945-1051.
442.Tam, S.-Y. et al: RabGEF1 is a negative regulator of mast cell activation and skin inflammation. Nature Immunology. 2004, 5:844-852.
472.Sonkoly, E. et al: Identification and characterization of a novel, psoriasis susceptibility-related noncoding RNA gene, PRINS. J. Biol. Chem. 2005, 280:24159-24167.

Obesity and Diabetes

50.Hu, E., Liang, P. and Spiegelman, B. M.: AdipoQ is a novel adipose-specific gene dysregulated in obesity. J. Biol. Chem. 1996, 271:10697-10703.
246.Venkateswaran, A. et al: Human white/murine ABC8 mRNA levels are highly induced in lipid-loaded macrophages - A transcriptional role for specific oxysterols. J. Biol. Chem. 2000, 275:14700-14707.
247.Zhao, L. et al: Transient induction of ENC-1, a kelch-related actin-binding protein, is required for adipocyte differentiation. J. Biol. Chem. 2000, 275:16845-16850.
248.Courilleau, D. et al: B-ind1, a novel mediator of Rac1 signaling cloned from sodium butyrate-treated fibroblasts. J. Biol. Chem. 2000, 275:17344-17348.
302.Corominola, H. et al: Identification of novel genes differentially expressed in omental fat of obese subjects and obese type 2 diabetic patients. Diabetes. 2001, 50:2822-2830.
470.Fukuhara, A. et al: Visfatin: A protein secreted by visceral fat that mimics the effects of insulin. Science. 2005, 307:426-430.
485.Wade, F.M. et al: Differential expression of the peripheral benzodiazepine receptor and gremlin during adipogenesis. Obesity Res. 2005, 13:818-822.

Applications in Plant Systems

20.Wilkinson et al: Identification of mRNAs with enhanced expression in ripening strawberry fruit using polymerase chain reaction differential display. Plant Mol. Biol. 1995, 27:1097-1108.
21.Johnson et al: Characterization of cDNA clones for differentially expressed genes in embryos of dormant and nondormant Avena fatua L. caryopses. Plant Mol. Biol. 1995, 28:113-22.
38.Joshi, C.P. and Nguyen, H.T.: Differential display-mediated rapid identification of different members of a multigene family, HSP 16.9 in wheat. Plant Mol. Biol. 1996, 31:575-84.
53.Ikeda, S. et al.: An aquaporin-like gene required for the Brassica self-incompatibility response. Science. 1997, 276:1564-66.
60.van der Knaap, E. et al: Expression of an ortholog of replication protein A1 (RPA1) is induced by gibberellin in deepwater rice. Proc. Natl. Acad. Sci. USA. 1997, 94:9979-9983.
114.Sablowski, R.W.M. and Meyerowitz, E.M.: A homolog of no apical meristem is an immediate target of the floral homeotic genes Apetala3/Pistillata. Cell. 1998, 92:93-103.
131.Brandstatter, I. and Kieber, J.J.: Two genes with similarity to bacterial response regulators are rapidly and specifically induced by cytokinin in Arabidopsis. The Plant Cell. 1998, 10:1009-1020.
132.Sanz, A. et al: PIOX, a new pathogen-induced oxygenase with homology to animal cyclooxygenase. The Plant Cell. 1998, 10:1523-1538.
145.Panavas, T. et al: Possible involvement of abscisic acid in senescence of daylily petals. J. Experimental Botany. 1998, 49:1987-1997.
148.Yamazaki, M. et al: Molecular cloning and biochemical characterization of a novel anthocyanin 5-O-Glucosyltransferase by mRNA differential display for plant forms regarding anthocyanin. J. Biol. Chem. 1999, 274:7405-7411.
210.Casselman, A.L. et al: Determining the physical limits of the Brassica S locus by recombinational analysis. The Plant Cell. 2000, 12:23-34.
211.Klueva, N.Y. et al: Genetic variability and molecular responses of root penetration in cotton. Plant Science. 2000, 155:41-47.
212.Wei, J.-Z. et al: Characterization of salt-induced changes in gene expression in tomato (Lycopersicon esculentum) roots and the role played by abscisic acid. Plant Science. 2000, 159:135-148.
221.Xie, Q. et al: Arabidopsis NAC1 transduces auxin signal downstream of TIR1 to promote lateral root development. Genes & Development. 2000, 14:3024-3036.
223.Aghoram, K. et al: Abg1: A novel gene up-regulated by abscisic acid in guard cells of Vicia faba. J. Experimental Botany. 2000, 51:1479-1480.
236.Mźller, J. et al: Disaccharide-mediated regulation of sucrose:fructan-6-fructosyltransferase, a key enzyme of fructan synthesis in barley leaves. Plant Physiology. 2000, 123:265-274.
237.Taybi, T. et al: A minimal serine/threonine protein kinase circadianly regulates phosphoenol pyruvate carboxylase activity in crassulacean acid metabolism-induced leaves of the common ice plant. Plant Physiology. 2000, 123:1471-1482.
303.Liu, Y. et al: The matrix metalloproteinase gene GmMMP2 is activated in response to pathogenic infections in soybean. Plant Physiology. 2001, 127:1788-1797.
304.Liu, J. et al: Isolation of a CONSTANS ortholog from Pharbitis nil and its role in flowering. Plant Physiology. 2001, 125:1821-1830.
306.Dunaeva, M. and Adamska, I.: Identification of genes expressed in response to light stress in leaves of Arabidopsis thaliana using RNA differential display. European J. Biochem. 2001, 268:5521-5529.
308.Weterings, K. et al: Regional localization of suspensor mRNAs during early embryo development. Plant Cell. 2001, 13:2409-2425.
314.Lievens, S. et al: A critical evaluation of differential display as a tool to identify genes involved in legume nodulation: looking back and looking forward. Nucleic Acids Res. 2001, 29:3459-3468.
369.Balandin, T. and Castresana, C.: AtCOX17, an Arabidopsis homolog of the yeast copper chaperone COX17. Plant Physiology. 2002, 129:1852-1857.
385.Hayama, R. et al: Isolation of rice genes possibly involved in the photoperiodic control of flowering by a fluorescent differential display method. Plant Cell Physiol. 2002, 43:494-504.
390.Karakaya, H.C. et al: Molecular mapping of the fasciation mutation in soybean, Glycine max (Leguminosae). Am. J. Botany. 2002, 89:559-565.
394.Vranov‡, E. et al: Comprehensive analysis of gene expression in Nicotiana tabacum leaves acclimated to oxidative stress. Proc. Natl. Acad. Sci. USA. 2002, 99:10870-10875.
403.Keates, S.E. et al: Altered gene expression in three plant species in response to treatment with Nep1, a fungal protein that causes necrosis. Plant Physiology. 2003, 132:1610-1622.
406.Collett, H. et al: Photosynthetic genes are differentially transcribed during the dehydration-rehydration cycle in the resurrection plant, Xerophyta humilis. J. Experimental Botany. 2003, 54:2593-2595.
412.op den Camp, R.G.L. et al: Rapid induction of distinct stress responses after the release of singlet oxygen in Arabidopsis. Plant Cell. 2003, 15:2320-2332.
417.Liu, X. and Baird, W.V.: Differential expression of genes regulated in response to drought or salinity stress in sunflower. Crop Science. 2003, 43:678-687.
418.Thomas, J.M.G. et al: Elevated temperature and carbon dioxide effects on soybean seed composition and transcript abundance. Crop Science. 2003, 43:1548-1557.
421.Liu, X. and Baird, W.V.: The ribosomal small-subunit protein S28 gene from Helianthus annuus (Asteraceae) is down-regulated in response to drought, high salinity, and abscisic acid. Am. J. Botany. 2003, 90:526-531.
426.Moore, R.C. et al: Genetic and functional analysis of DD44, a sex-linked gene from the dioecious plant silene latifolia, provides clues to early events in sex chromosome evolution. Genetics. 2003, 163:321-334.
433.Butowt, R. et al: A putative plastidic glucose translocator is expressed in heterotrophic tissues that do not contain starch, during olive (Olea europea L.) fruit ripening. Plant Cell Physiol. 2003, 44:1152-1161.
466.Mazel, A. et al: Induction of salt and osmotic stress tolerance by overexpression of an intracellular vesicle trafficking protein AtRab7 (AtRabG3e). Plant Physiology. 2004, 134:118-128.
467.Chandler, J.W. and Melzer, S.: An alpha-crystallin gene, ACD31.2 from Arabidopsis is negatively regulated by FPF1 overexpression, floral induction, gibberellins, and long days. J. Experimental Botany. 2004, 55:1433-1435.
468.Liu, X. and Baird, W.V.: Identification of a novel gene, HAABRC5, from Helianthus annuus (Asteraceae) that is upregulated in response to drought, salinity, and abscisic acid. Am. J. Botany. 2004, 91:184-191.
483.Zhou, S. et al: Identification of genes regulated by low temperature in Pachysandra terminalis Sieb. et Zucc using cDNA differential display. HortScience. 2005, 40:1995-1997.
484.O'Brien, M. et al: Lipid signaling in plants. Cloning and expression analysis of the obtusifoliol 14alpha-demethylase from Solanum chacoense Bitt., a pollination- and fertilization-induced gene with both obtusifoliol and lanosterol demethylase activity. Plant Physiology. 2005, 139:734-749.

Applications in Drosophila and Insect Systems

126.Kang, D. et al: A peptidoglycan recognition protein in innate immunity conserved from insects to humans. Proc. Natl. Acad. Sci. USA. 1998, 95:10078-10082.
160.Blau, J. and Young, M.W.: Cycling vrille expression is required for a functional Drosophila clock. Cell. 1999, 99:661-671.
202.Shaw, P.J. et al: Correlates of sleep and waking in Drosophila melanogaster. Science. 2000, 287:1834-1837.

Applications in Fish and Amphibian Systems

42.Green, C.B. et al: Use of a high stringency differential display screen for identification of retinal mRNAs that are regulated by a circadian clock. Molecular Brain Research. 1996, 37:157-65.
43.Green, C.B. et al: Identification of a novel vertebrate circadian clock-regulated gene encoding the protein nocturnin. Proc. Natl. Acad. Sci. USA. 1996, 93:14884-88.
217.Bobe, J. and Goetz, F.W.: A tumor necrosis factor decoy homologue is up-regulated in the brook trout (Salvelinus fontinalis) ovary at the completion of ovulation. Biol. Reproduction. 2000, 62:420-426.
235.Bobe, J. and Goetz, F.W.: A S100 homologue mRNA isolated by differential display PCR is down-regulated in the brook trout (Salvelinus fontinalis) post-ovulatory ovary. Gene. 2000, 257:187-194.
305.Kinoshita, S. et al: A novel heat stress-responsive gene in the marine diatom Chaetoceros compressum encoding two types of transcripts, a trypsin-like protease and its related protein, by alternative RNA splicing. European J. Biochem. 2001, 268:4599-4609.
326.Bobe, J. and Goetz, F.W.: An ovarian progastricsin is present in the trout coelomic fluid after ovulation. Biol. Reproduction. 2001, 64:1048-1055.
491.Meyer, J.N. et al: Differential display of hepatic mRNA from killifish (Fundulus heteroclitus) inhabiting a Superfund estuary. Aquatic Toxicology. 2005, 73:327-341.

Applications in Yeast and Fungal Systems

62.Shen, W. and Green, M.R.: Yeast TAFII145 as a core promoter selectivity factor, not a general co-activator. Cell. 1997, 90:615-24.
75.Nag, D.K. et al: SSP1, a gene necessary for proper completion of meiotic divisions and spore formation in Saccharomyces cerevisiae. Mol. Cell. Biol. 1997, 17:7029-7039.
99.Ivanova, A.V. et al: The chromo and SET domains of the Clr4 protein are essential for silencing in fission yeast. Nature Genetics. 1998, 19:192-195.
139.Liu, Z.-M. and Kolattukudy, P.E.: Identification of a gene product induced by hard-surface contact of Colletotrichum gloeosporioides Conidia as a ubiquitin-conjugating enzyme by yeast complementation. J. Bacteriology. 1998, 180:3592-3597.
146.Xu, Z. and Norris, D.: The SFP1 gene product of Saccharomyces cerevisiae regulates G2/M transitions during the mitotic cell cycle and DNA-damage response. Genetics. 1998, 150:1419-1428.
149.Joshi, L. et al: Cloning, expression, and substrate specificity of MeCPA, a zinc carboxypeptidase that is secreted into infected tissues by the fungal entomopathogen Metarhizium anisopliae. J. Biol. Chem. 1999, 274:9803-9811.
184.Welch, E.M. and Jacobson, A.: An internal open reading frame triggers nonsense-mediated decay of the yeast SPT10 mRNA. The EMBO Journal. 1999, 18:6134-6145.
188.Zhang, S. et al: MGA2 or SPT23 is required for transcription of the d9 fatty acid desaturase gene, OLE1, and nuclear membrane integrity in Saccharomyces cerevisiae. Genetics. 1999, 151:473-483.
199.Basse, C.W. et al: Characterization of a Ustilago maydis gene specifically induced during the biotrophic phase: Evidence for negative as well as positive regulation. Mol. Cell. Biol. 2000, 20:329-339.
200.Mai, B. and Breeden, L.: CLN1 and its repression by Xbp1 are important for the efficient sporulation in budding yeast. Mol. Cell. Biol. 2000, 20:478-487.
309.Hanna, M.N. et al: uvrA is an acid-inducible gene involved in the adaptive response to low pH in Streptococcus mutans. J. Bacteriology. 2001, 183:5964-5973.
364.Sebert, M.E. et al: Microarray-based identification of htrA, a Streptococcus pneumoniae gene that is regulated by the CiaRH two-component system and contributes to nasopharyngeal colonization. Infection and Immunity. 2002, 70:4059-4067.
366.Rude, T.H. et al: Relationship of the glyoxylate pathway to the pathogenesis of Cryptococcus neoformans. Infection and Immunity. 2002; 70:5684-5694.
378.Rodriguez-Vargas, S. et al: Gene expression analysis of cold and freeze stress in baker's yeast. Applied and Environmental Microbiology. 2002, 68:3024-3030.
411.Luberto, C. et al: Identification of App1 as a regulator of phagocytosis and virulence of Cryptococcus neoformans. J. Clin. Invest. 2003, 112:1080-1094.
422.Toffaletti, D.L. et al: Regulation of cytochrome c oxidase subunit 1 (COX1) expression in Cryptococcus neoformans by temperature and host environment. Microbiology. 2003, 149:1041-1049.
469.Woyke, T. et al: Differential gene expression in auristatin PHE-treated Cryptococcus neoformans. Antimicrobial Agents & Chemotherapy. 2004, 48:561-567.
482.Panepinto, J. et al: The DEAD-box RNA helicase Vad1 regulates multiple virulence-associated genes in Cryptococcus neoformans. J. Clin. Invest. 2005, 115:632-641.

Applications in Bacterial Systems

150.Nakashima, S. et al: Molecular cloning and expression of a stress-responsive mitogen-activated protein kinase-related kinase from Tetrahymena cells. J. Biol. Chem. 1999, 274:9976-9983.
204.Taroncher-Oldenburg, G. and Anderson, D.M.: Identification and characterization of three differentially expressed genes, encoding S-adenosylhomocysteine hydrolase, methionine aminopeptidase, and a histone-like protein, in the toxic dinoflagellate Alexandrium fundyenase. Applied and Environmental Microbiology. 2000, 66:2105-2112.
213.Brzostowicz, P.C. et al: Simultaneous identification of two cyclohexanone oxidation genes from an environmental Brevibacterium isolate using mRNA differential display. J. Bacteriology. 2000, 182:4241-4248.
222.Sturtevant, Joy: Applications of differential display reverse transcription-PCR to molecular pathogenesis and medical mycology. Clinical Microbiology Reviews. 2000, 13:408-427.
363.GutiŽrrez-Pabello, J.A. et al: Upregulation of Thymosin §-10 by Mycobacterium bovis infection of bovine macrophages is associated with apoptosis. Infection and Immunity. 2002, 70:2121-2127.
414.Delgado-Jarana, J. et al: Glucose uptake in Trichoderma harzianum: role of gtt1. Eukaryotic Cell. 2003, 2:708-717.
459.Xie, H. et al: Porphyromonas gingivalis genes involved in fimA regulation. Infection and Immunity. 2004, 72:651-658.


B) Representative DD Reference List

(Sorted Chronologically)


Reference numbers underlined in green are from GenHunter customers
1.Liang, P. and Pardee, A.B.: Differential display of eukaryotic messenger RNA by means of the polymerase chain reaction. Science. 1992, 257:967-71.
2.Liang, P. et al: Differential display and cloning of messenger RNAs from human breast cancer versus mammary epithelial cells. Cancer Research. 1992, 52:6966-68.
3.Zhang, L. and Medina, D.: Gene expression screening for specific genes associated with mouse mammary tumor development. Mol. Carcinog. 1993, 8:123-26.
4.Liang, P. et al: Distribution and cloning of eukaryotic mRNAs by means of differential display: refinements and optimization. Nucleic Acids Res. 1993, 21:3269-75.
5.Sun, Y. et al: Molecular cloning of five messenger RNAs differentially expressed in preneoplastic or neoplastic JB6 mouse epidermal cells: one is homologous to human tissue inhibitor of metaloproteinase. Cancer Research. 1994, 54:1139-44.
6.Liang, P. et al: Ras activation of genes: Mob-1 as a model. Proc. Natl. Acad. Sci. USA. 1994, 91:12515-125119.
7.Utans, U. et al: Chronic cardiac rejection: identification of five up-regulated genes in transplanted hearts by differential mRNA display. Proc. Natl. Acad. Sci. USA. 1994, 91:6463-67.
8.Russell, M. et al: Identification and up-regulation of galactose/N-acetylgalactosamine macrophage lectin in rat cardiac allografts with arteriosclerosis. J. Clin. Invest. 1994, 94:722-30.
9.Liang, P. et al: Analysis altered gene expression by differential display. Methods in Enzymol. 1995, 254:304-21.
10.Liang, P. et al: Differential display using one-base anchored oligo-dT primers. Nucleic Acids Res. 1994, 22:5763-64.
11.Liang, P. et al: Method of differential display. Methods in Mol. Genetics. (Academic Press) 1994, 5:3-16.
12.Chen, Z. et al: A cautionary note on the reaction tubes for differential display and cDNA amplification in thermal cycling. BioTechniques. 1994, 16:1003-1006.
13.Okamato, K. and Beach, D.: Cyclin G is a transcription target of the p53 tumor suppressor protein. The EMBO Journal. 1994, 13: 4816-22.
14.Wang, X. and Feuerstein, G.Z.: Direct sequencing of DNA isolated from mRNA differential display. BioTechniques. 1995, 18:448-52.
15.Trentmann, S.M. et al: Alternatives to 35S as a label for the differential display of eukaryotic messenger RNA. Science. 1995, 267:1186-87.
16.McCarthy, S.A. et al: Rapid induction of heparin-binding epidermal growth factor/diphtheria toxin receptor expression by Raf and Ras oncogenes. Genes & Development. 1995, 9:1953-64.
17.Guimaraes, M.J. et al: Differential Display by PCR: novel findings and applications. Nucleic Acids Res. 1995, 23:1832-33.
18.Guimaraes, M.J.: et al: A new approach to the study of haematopoietic development in the yolk sac and embryoid bodies. Development. 1995, 121: 3335-46.
19.Douglass et al: PCR differential display identifies a rat brain mRNA that is transcriptionally regulated by cocaine and amphetamine. J. Neurosciences. 1995, 15:2471-81.
20.Wilkinson et al: Identification of mRNAs with enhanced expression in ripening strawberry fruit using polymerase chain reaction differential display. Plant Mol. Biol. 1995, 27:1097-1108.
21.Johnson et al: Characterization of cDNA clones for differentially expressed genes in embryos of dormant and nondormant Avena fatua L. caryopses. Plant Mol. Biol. 1995, 28:113-22.
22.Luna et al: Decreased expression and function of a-2 macroglobulin receptor/low density lipoprotein receptor-related protein in photodynamic therapy-resistant mouse tumor cell. Cancer Research. 1995, 55:1820-23.
23.van Groningen, J.J.M. et al: Identification of melanoma inhibitory activity and other differentially expressed messenger RNAs in human melanoma cell lines with different metastatic capacity by messenger RNA differential display. Cancer Research. 1995, 55:6237-6243.
24.Autieri et al: Use of differential display to identify differentially expressed mRNAs induced by rat carotid balloon angioplasty. Laboratory Investigation. 1995, 72:656-61.
25.Sakuma et al: Radiation induction of the receptor tyrosine kinase gene ptk-3 in normal rat astrocytes. Radiation Research. 1995, 143:1-7.
26.Liang, P. and Pardee, A.B.: Recent advances in differential display. Current Opinion in Immunology. 1995, 7:274-80.
27.Subramaniam, M. et al: Identification of a novel TGF-b-regulated gene encoding a putative zinc finger protein in human osteoblasts. Nucleic Acids Res. 1995, 23:4907-12.
28.Tan, R. et al: Identification of the Lysyl Oxidase Gene as a target of the Antioncogenic Transcription Factor, IRF-1 and its possible role in tumor suppression. Cancer Research. 1996, 56:2417-21.
29.Všgeli-Lange, R. et al: Rapid selection and classification of positive clones generated by mRNA differential display. Nucleic Acids Res. 1996, 24:1385-86.
30.Zhu, Y. et al: DUB-1, a deubiquitinating enzyme with growth suppressing activity. Proc. Natl. Acad. Sci. USA. 1996, 93:3275-79.
31.Zhang, H. et al: Differential screening of gene expression difference enriched by differential display. Nucleic Acids Res. 1996, 24:2454-55.
32.Scholz, G. et al: Transcriptional down regulation of the nov proto-oncogene in fibroblast transformed by p60v-src Mol. Cell. Biol. 1996, 16:481-86.
33.Francia, G. et al: Identification by differential display of annexin VI, a gene differentially expressed during melanoma progression. Cancer Research. 1996, 56:3855-58.
34.Lehar, S.M. et al: Identification and cloning of EI24, a gene induced by p53 in etoposide-treated cells. Oncogene. 1996, 12:1181-87.
35.Chen, J. et al: Identification of differentially expressed genes in rat aortic allograft vasculopathy. American Journal of Pathology. 1996, 149:597-611.
36.Murphy, M. et al: Wild-type p53 negatively regulates the expression of a microtubule-associated protein. Genes & Development. 1996, 10:2971-80.
37.Wang, F.L. et al: Two differentially expressed genes in normal human prostate tissue and in carcinoma. Cancer Research. 1996, 56:3634-37.
38.Joshi, C.P. and Nguyen, H.T.: Differential display-mediated rapid identification of different members of a multigene family, HSP 16.9 in wheat. Plant Mol. Biol. 1996, 31:575-84.
39.Dietz, U.H. and Sandell, L.J.: Cloning of a retinoic acid-sensitive mRNA expressed in cartilage and during chondrogenesis. J. Biol. Chem. 1996, 271:3311-16.
40.Averboukh, L. et al: Regulation of S100P expression by androgen. The Prostate. 1996, 29:350-55.
41.Wan, J.S. et al: Cloning differentially expressed mRNAs. Nature Biotechnology. 1996, 14:1685-91.
42.Green, C.B. et al: Use of a high stringency differential display screen for identification of retinal mRNAs that are regulated by a circadian clock. Molecular Brain Research. 1996, 37:157-65.
43.Green, C.B. et al: Identification of a novel vertebrate circadian clock-regulated gene encoding the protein nocturnin. Proc. Natl. Acad. Sci. USA. 1996, 93:14884-88.
44.Wang, X. et al: Interferon-inducible protein-10 involves vascular smooth muscle cell migration, proliferation, and inflammatory response. J. Biol. Chem. 1996, 271:24286-24293.
45.Kokame, K. et al: Homocysteine-respondent genes in vascular endothelial cells identified by differential display analysis. GRP78/BiP and novel genes. J. Biol. Chem. 1996, 271:29659-29665.
46.Taylor, G.A. et al: Identification of a novel GTPase, the inducibly expressed GTPase, that accumulates in response to interferon [gamma]. J. Biol. Chem. 1996, 271:20399-20405.
47.Bush, E.W. et al: Overexpression of myotonic dystrophy kinase in BC[(3)]H1 cells induces the skeletal muscle phenotype. J. Biol. Chem. 1996, 271:548-552.
48.Miyazaki, T. et al: Molecular cloning of a novel thyroid hormone-responsive gene, ZAKI-4, in human skin fibroblasts. J. Biol. Chem. 1996, 271:14567-14571.
49.Crino, P.B. and Eberwine, J.: Molecular characterization of the dendritic growth cone: regulated mRNA transport and local protein synthesis. Neuron. 1996, 17:1173-1187.
50.Hu, E., Liang, P. and Spiegelman, B. M.: AdipoQ is a novel adipose-specific gene dysregulated in obesity. J. Biol. Chem. 1996, 271:10697-10703.
51.Sheikh-Hamad, D. et al: CD9 antigen mRNA is induced by hypertonicity in two renal epithelial cell lines. Am. J. Physiol: Cell Physiology. 1996, 270:C253-258.
52.Jin, F. et al: Secretory leukocyte protease inhibitor: a macrophage product induced by and antagonistic to bacterial lipopolysaccharide. Cell. 1997, 88:417-26.
53.Ikeda, S. et al.: An aquaporin-like gene required for the Brassica self-incompatibility response. Science. 1997, 276:1564-66.
54.Topol, L.Z. et al.: Identification of drm, a novel gene whose expression is suppressed in transformed cells and which can inhibit growth of normal but not transformed cells in culture. Mol. Cell. Biol. 1997, 17:4801-10.
55.Israeli, D. et al.: A novel p53-inducible gene, PAG608, encodes a nuclear zinc finger protein whose overexpression promotes apoptosis. The EMBO Journal. 1997, 16:4384-92.
56.Montano, M.M. and Katzenellenbogen, B.S.: The quinone reductase gene: a unique estrogen receptor-regulated gene that is activated by antiestrogens. Proc. Natl. Acad. Sci. USA. 1997, 94:2581-2586.
57.Lin, T.-M. and Chang, C.: Cloning and characterization of TDD5, an androgen target gene that is differentially repressed by testosterone and dihydrotestosterone. Proc. Natl. Acad. Sci. USA. 1997, 94:4988-4993.
58.Fiscella, M. et al.: Wip1, a novel human protein phosphatase that is induced in response to ionizing radiation in a p53-dependent manner. Proc. Natl. Acad. Sci. USA. 1997, 94:6048-53.
59.Robinson, L. et al: ETS target genes: Identification of Egr1 as a target by RNA differential display and whole genome PCR techniques. Proc. Natl. Acad. Sci. USA. 1997, 94:7170-7175.
60.van der Knaap, E. et al: Expression of an ortholog of replication protein A1 (RPA1) is induced by gibberellin in deepwater rice. Proc. Natl. Acad. Sci. USA. 1997, 94:9979-9983.
61.Pendurthi, U.R. et al: Binding of factor VIIa to tissue factor induces alterations in gene expression in human fibroblast cells: up-regulation of poly(A) polymerase. Proc. Natl. Acad. Sci. USA. 1997, 94:12598-12603.
62.Shen, W. and Green, M.R.: Yeast TAFII145 as a core promoter selectivity factor, not a general co-activator. Cell. 1997, 90:615-24.
63.Bartl, S. et al.: Identification of mouse histone deacetylase 1 as a growth factor-inducible gene. Mol. Cell. Biol. 1997, 17:5033-43.
64.Kuno, K. et al: Molecular cloning of a gene encoding a new type of metalloproteinase-disintegrin family protein with thrombospondin motifs as an inflammation associated gene. J. Biol. Chem. 1997, 272:556-562.
65.Conti, B. et al: Induction of interferon-[gamma] inducing factor in the adrenal cortex. J. Biol. Chem. 1997, 272:2035-2037.
66.Li, D. et al: Oncogenic Raf-1 induces the expression of non-his-tone chromosomal architectural protein HMGI-C via a p44/p42 mitogen-activated protein kinase-dependent pathway in salivary epithelial cells. J. Biol. Chem. 1997, 272:25062-25070.
67.Dong, L. et al: Down-regulation of major histocompatibility complex Q1b gene expression by 2,3,7,8-tetrachlorodibenzo-p-dioxin. J. Biol. Chem. 1997, 272:29614-29619.
68.Jeyaseelan, R. et al: A novel cardiac-restricted target for doxorubicin. Carp, a nuclear modulator of gene expression in cardiac progenitor cells and cardiomyocytes. J. Biol. Chem. 1997, 272:22800-22808.
69.Jeyaseelan, R. et al: Molecular mechanisms of doxorubicin-induced cardiomyopathy. Selective suppression of reiske iron-sulfur protein, ADP/ATP translocase, and phosphofructokinase genes is associated with ATP depletion in rat cardiomyocytes. J. Biol. Chem. 1997, 272:5828-5832.
70.Flanigan, T.P. and Leslie R.A.: Changes in brain gene expression in psychiatric illnessŃmRNA differential display provides some clues. Molecular Psychiatry. 1997, 2:451-456.
71.Everett L.M. et al: A novel estrogen-enhanced transcript identified in the rat uterus by differential display. Endocrinology. 1997, 138:3836-3841.
72.Catalano R.D. et al: Differential display to identify and isolate novel genes expressed during spermatogenesis. Molecular Human Reproduction. 1997, 3:215-221.
73.Livesey, F.J. et al: A Schwann cell mitogene accompanying regeneration of motor neurons. Nature. 1997, 390:614-618.
74.You, M. et al.: ch-IAP1, a member of the inhibitor-of-apoptosis protein family, is a mediator of the antiapoptotic activity of the v-Rel oncoprotein. Mol. Cell. Biol. 1997, 17:7328-7341.
75.Nag, D.K. et al: SSP1, a gene necessary for proper completion of meiotic divisions and spore formation in Saccharomyces cerevisiae. Mol. Cell. Biol. 1997, 17:7029-7039.
76.Yamada, E. et al: Differential display analysis of murine collagen-induced arthritis: cloning of the cDNA-encoding murine ATPase inhibitor. Immunology. 1997, 92:571-576.
77.Rafaeloff, R. et al: Cloning and sequencing of the pancreatic islet neogenesis associated protein (INGAP) and its expression in islet neogenesis in hamsters. J. Clin. Invest. 1997, 99:2100-2109.
78.Kothapalli, R. et al: Detection of ebaf, a novel human gene of the transforming growth factor b superfamily: Association of gene expression with endometrial bleeding. J. Clin. Invest. 1997, 99:2342-2350.
79.Li. Y. and Youssoufian, H.: MxA overexpression reveals a com-mon genetic link in four Fanconi anemia complementation groups. J. Clin. Invest. 1997, 100:2873-2880.
80.Tohda, C. et al: Increased expression of mRNA for myocyte-specific enhancer binding factor (MEF) 2C in the cerebral cortex of the itching mouse. Neuroscience Research. 1997, 29:209-215.
81.Lorentz, O. et al: Key role of the Cdx2 homeobox gene in extracellular matrix-mediated intestinal cell differentiation. J. Cell Biology. 1997, 139:1553-1565.
82.Schwiebert, L.M. et al: Identification of novel inducible genes in airway epithelium. American J. of Respiratory Cell & Mol. Biol. 1997, 17:106-113.
83.You, L. and Jakowlew, S.B.: Identification of early growth response gene-1 (Egr-1) as a phorbol myristate acetate-induced gene in lung cancer cells by differential mRNA display. American J. of Respiratory Cell & Mol. Biol. 1997, 17:617-624.
84.Riley, H.D. et al: The expression of acylphosphatase is associated with the metastatic phonotype in human colorectal tumors. Carcinogenesis. 1997, 18:2453-2455.
85.Maekawa, T.L. et al: A novel gene (drad-1) expressed in hematopoiesis-supporting stromal cell lines, ST2, PA6 and A54 preadipocytes: Use of mRNA differential display. Stem Cells. 1997, 15:334-339.
86.Lee, M.-E. and Haber, E.: Collagen VIII is expressed by vascular smooth muscle cells in response to vascular injury. Circulation Research. 1997, 80:532-541.
87.Kasukabe, T. et al: TRA1, a novel mRNA highly expressed in leukemogenic mouse monocytic sublines but not in nonleukemogenic sublines. Blood. 1997, 89:2975-2985.
88.Karginova, E.A. et al: Zis: A developmentally regulated gene expressed in juxtaglomerular cells. Am. J. Physiol: Cell Physiology. 1997, 273:731F-738F.
89.Liu, Q.-R. et al: A developmental gene (Tolloid/BMP-1) is regulated in Aplysia neurons by treatments that induce long-term sensitization. Journal of Neuroscience. 1997, 17:755-764.
90.Rivas, M.V. et al: Identification of aberrantly regulated genes in diseased skin using the cDNA differential display technique. J. Invest. Dermatology. 1997, 108:188-194.
91.Padanilam, B.J. and Hammerman, M.R.: Ischemia-induced receptor for activated C kinase (RACK1) expression in rat kidneys. Am. J. Physiol: Renal Physiology. 1997, 272:F160-166.
92.Lewington, A.J. et al: Induction of calcyclin after ischemic injury to rat kidney. Am. J. Physiol: Renal Physiology. 1997, 273:F380-385.
93.Karginova, E.A. et al: Zis: a developmentally regulated gene expressed in juxtaglomerular cells. Am. J. Physiol: Renal Physiology. 1997, 273:F731-738.
94.Sirokman, G. et al: Endogenous retroviral transcripts in myocytes from spontaneously hypertensive rats. Hypertension. 1997, 30:88-93.
95.Garnier, M. et al: Identification of estrogen-responsive genes in neuroblastoma SK-ER3 cells. Journal of Neuroscience. 1997, 17:4591-4599.
96.Levy, F.H. and Kelly, D.P.: Regulation of ATP synthase subunit e gene expression by hypoxia: cell differentiation stage-specific control. Am. J. Physiol: Cell Physiology. 1997, 272:C457-465.
97.Wu, M.X. et al: IEX-1L, an apoptosis inhibitor involved in NF-kB-mediated cell survival. Science. 1998, 281:998-1001.
98.Lawlor, E.R. et al: The Ewing tumor family of peripheral primitive neuroectodermal tumors expresses human gastrin-releasing peptide. Cancer Research. 1998, 58:2469-2476.
98.Lawlor, E.R. et al: The Ewing tumor family of peripheral primitive neuroectodermal tumors expresses human gastrin-releasing peptide. Cancer Research. 1998, 58:2469-2476.
99.Ivanova, A.V. et al: The chromo and SET domains of the Clr4 protein are essential for silencing in fission yeast. Nature Genetics. 1998, 19:192-195.
100.Kemppainen, R.J. and Behrend, E.N.: Dexamethasone rapidly induces a novel Ras superfamily member-related gene in AtT-20 cells. J. Biol. Chem. 1998, 273:3129-3131.
101.Noel, L.S. et al: RoBo-1, a novel member of the urokinase plasminogen activator receptor/CD59/Ly-6/snake toxin family selectively expressed in rat bone and growth plate cartilage. J. Biol. Chem. 1998, 273:3878-3883.
102.Dandoy-Dron, F. et al: Gene expression in Scrapie. Cloning of a new Scrapie-responsive gene and the identification of increased levels of seven other mRNA transcripts. J. Biol. Chem. 1998, 273:7691-7697.
102.Dandoy-Dron, F. et al: Gene expression in Scrapie. Cloning of a new Scrapie-responsive gene and the identification of increased levels of seven other mRNA transcripts. J. Biol. Chem. 1998, 273:7691-7697.
103.Kotelvets, L. et al: Inhibition by platelet-activating factor of Src- and hepatocyte growth factor-dependent invasiveness of intestinal and kidney epithelial cells: Phosphatidylinosital 3Ő-kinase is a critical mediator of tumor invasion. J. Biol. Chem. 1998, 273:14138-14145.
104.Gao, L. et al: A novel response to dioxin. Induction of ecto-ATPase gene expression. J. Biol. Chem. 1998, 273:15358-15365.
105.Takeda, K. et al: Identification of a novel bone morphogenetic protein-responsive gene that may function as a noncoding RNA. J. Biol. Chem. 1998, 273:17079-17085.
106.Chacko, G. et al: Induction of acute translational response genes by homocysteine: Elongation factors-1-µ, -b, -d. J. Biol. Chem. 1998, 273:19840-19846.
107.Tabor, D.E. et al: Transcriptional activation of the Stearoyl-CoA desaturase 2 gene by sterol regulatory element-binding protein/adipocyte determination and differentiation Factor 1. J. Biol. Chem. 1998, 273:22052-22058.
108.Du, M. et al: Cloning and expression analysis of a novel salicylate suppressible gene, Hs-CUL-3, a member of cullin/Cdc53 family. J. Biol. Chem. 1998, 273:24289-24292.
109.Badea, T.C. et al: Molecular cloning and characterization of RGC-32, a novel gene induced by complement activation in oligodendrocytes. J. Biol. Chem. 1998, 273:26977-26981.
109.Badea, T.C. et al: Molecular cloning and characterization of RGC-32, a novel gene induced by complement activation in oligodendrocytes. J. Biol. Chem. 1998, 273:26977-26981.
110.Zentner, M.D. et al: The amiloride-sensitive epithelial sodium channel a-subunit is transcriptionally down-regulated in rat parotid cells by the extracellular signal-regulated protein kinase pathway. J. Biol. Chem. 1998, 273:30770-30776.
111.Austin, R.C. et al: Homocysteine-dependent alterations in mitochondrial gene expression, function and structure: Homocysteine and H2O2 act synergistically to enhance mitochondrial damage. J. Biol. Chem. 1998, 273:30808-30817.
112.Hu, S-I et al: Human HtrA, an evolutionarily conserved serine protease identified as a differentially expressed gene product in osteoarthritic cartilage. J. Biol. Chem. 1998, 273:34406-34412.
113.Bein, K. et al: Myb-dependent regulation of thrombospondin 2Ęexpression. Role of mRNA stability. J. Biol. Chem. 1998, 273:21423-21429.
114.Sablowski, R.W.M. and Meyerowitz, E.M.: A homolog of no apical meristem is an immediate target of the floral homeotic genes Apetala3/Pistillata. Cell. 1998, 92:93-103.
115.Chung, K.-C. et al: Raf and fibroblast growth factor phosphorylate Elk1 and activate the serum response element of the immediate early gene pip92 by mitogen-activated protein kinase-independent as well as -dependent signaling pathways. Mol. Cell. Biol. 1998, 18:2272-2281.
116.Zhang, R. et al: Identification of rCop-1, a new member of the CCN protein family, as a negative regulator for cell transformation. Mol. Cell. Biol. 1998, 18:6131-6141.
117.Castagnino, P. et al: Induction of tissue inhibitor of metallopro-teinases -3 is a delayed early cellular response to hepatocyte growth factor. Oncogene. 1998, 17:481-492.
118.Nagano, T. et al: Differentially expressed olfactomedin-related glycoproteins (pancortins) in the brain. Molecular Brain Research. 1998, 53:13-23.
119.Wang, X.B. and Uhl, G.R.: Subtracted differential display - genes with amphetamine-altered expression patterns include calcineurin. Molecular Brain Research. 1998, 53:344-347.
120.Fang, Z. et al: Identification of novel factors that regulate GnRH gene expression and neuronal migration. Endocrinology. 1998, 39:3654-3657.
120.Fang, Z. et al: Identification of novel factors that regulate GnRH gene expression and neuronal migration. Endocrinology. 1998, 39:3654-3657.
121.Zhou, D. et al: Cap43, a novel gene specifically induced by Ni2+ compounds. Cancer Research. 1998, 58:2182-2189.
122.Liang, P.: Factors ensuring successful use of differential display. Methods: A Companion to Methods in Enzymology. 1998, 16:361-364.
123.Jo, H. et al: Cloning oncogenic Ras-regulated genes by differential display. Methods: A Companion to Methods in Enzymology. 1998, 16:365-372.
124.Arakawa, H. et al: Identification and characterization of the ARP1 gene, a target for the human acute leukemia ALL1 gene. Proc. Natl. Acad. Sci. USA. 1998, 95:4573-4578.
125.Furumura, M. et al: Characterization of genes modulated during pheomelanognesis using differential display. Proc. Natl. Acad. Sci. USA. 1998, 95:7374-7378.
126.Kang, D. et al: A peptidoglycan recognition protein in innate immunity conserved from insects to humans. Proc. Natl. Acad. Sci. USA. 1998, 95:10078-10082.
127.Sun, H.B. et al: MRG1, the product of a melanocyte-specific gene related gene, is a cytokine-inducible transcription factor with transformation activity. Proc. Natl. Acad. Sci. USA. 1998, 95:13555-13560.
128.Tohonen, V. et al: Testatin: A cystatin-related gene expressed during early testis development. Proc. Natl. Acad. Sci. USA. 1998, 95:14208-14213.
129.Semizarov, D. et al: A lineage-specific protein kinase crucial for myeloid maturation. Proc. Natl. Acad. Sci. USA. 1998, 95:15412-15417.
130.Matz, M.V. and Lukyanov, S.A: Different strategies of differential display: areas of application. Nucleic Acids Res. 1998, 26:5537-5543.
131.Brandstatter, I. and Kieber, J.J.: Two genes with similarity to bacterial response regulators are rapidly and specifically induced by cytokinin in Arabidopsis. The Plant Cell. 1998, 10:1009-1020.
132.Sanz, A. et al: PIOX, a new pathogen-induced oxygenase with homology to animal cyclooxygenase. The Plant Cell. 1998, 10:1523-1538.
133.Morikawa, Y. et al: Induction of synaptosomal-associated protein-23 kD (SNAP-23) by various cytokines. Blood. 1998, 92:129-135.
134.Xu, D. et al: Selective expression of a stable cell surface molecule on type 2 but not type 1 helper T cells. J. Experimental Medicine. 1998, 187:787-794.
135.Liu, Y. and Kulesz-Martin, M.F.: Altered gene expression in a clonal epidermal cell model of carcinogenesis identified by RNA differential display. Carcinogenesis. 1998, 19:683-686.
136.Ross, R. et al: Maturation of epidermal Langerhans cells in vitro is accompanied by down regulation of 4F2 (CD98) as determined by differential display. J. Invest. Dermatology. 1998, 110:57-61.
137.Takaishi, M. et al: Isolation and characterization of a putative keratin-associated protein gene expressed in embryonic skin of mice. J. Invest. Dermatology. 1998, 111:1009-1020.
138.Chen, J. et al: Eotaxin and capping protein in experimental vasculopathy. American Journal of Pathology. 1998, 153:81-90.
139.Liu, Z.-M. and Kolattukudy, P.E.: Identification of a gene product induced by hard-surface contact of Colletotrichum gloeosporioides Conidia as a ubiquitin-conjugating enzyme by yeast complementation. J. Bacteriology. 1998, 180:3592-3597.
140.Dovat, S. et al: Targeted identification of zinc finger genes expressed in rat lungs. Am. J. Physiol: Lung Cell. & Molec. Physiol. 1998, 275:30L-37L.
141.Li, X.-L. et al: RNase L mediates the antiviral effect of interferon through a selective reduction in viral RNA during Encephalomyocarditis virus infection. J. Virology. 1998, 72:2752-2759.
142.Wigle, D.A. et al: AML1-like transcription factor induces serine elastase activity in ovine pulmonary artery smooth muscle cells. Circulation Research. 1998, 252-263.
143.Matsuba, T. et al: Identification of glucocorticoid- and adenovirus E1A-regulated genes in lung epithelial cells by differential display. American J. Respiratory Cell & Mol. Biol. 1998, 18:243-254.
144.Chen, J. et al: Enhanced levels of several mitochondrial mRNA transcripts and mitochondrial superoxide production during ethinyl estradiol-induced hepatocarcinogenesis and after estrogen treatment of HepG2 cells. Carcinogenesis. 1998, 19:2187-2193.
145.Panavas, T. et al: Possible involvement of abscisic acid in senescence of daylily petals. J. Experimental Botany. 1998, 49:1987-1997.
146.Xu, Z. and Norris, D.: The SFP1 gene product of Saccharomyces cerevisiae regulates G2/M transitions during the mitotic cell cycle and DNA-damage response. Genetics. 1998, 150:1419-1428.
147.Krushel, L.A. et al: NF-KB activity is induced by neural cell adhesion molecule binding to neurons and astrocytes. J. Biol. Chem. 1999, 274:2432-2439.
148.Yamazaki, M. et al: Molecular cloning and biochemical characterization of a novel anthocyanin 5-O-Glucosyltransferase by mRNA differential display for plant forms regarding anthocyanin. J. Biol. Chem. 1999, 274:7405-7411.
149.Joshi, L. et al: Cloning, expression, and substrate specificity of MeCPA, a zinc carboxypeptidase that is secreted into infected tissues by the fungal entomopathogen Metarhizium anisopliae. J. Biol. Chem. 1999, 274:9803-9811.
150.Nakashima, S. et al: Molecular cloning and expression of a stress-responsive mitogen-activated protein kinase-related kinase from Tetrahymena cells. J. Biol. Chem. 1999, 274:9976-9983.
151.Hiki, K. et al: Cloning, characterization, and chromosomal location of a novel human K+-Cl- cotransporter. J. Biol. Chem. 1999, 274:10661-10667.
152.Reimer, C.L. et al: Altered regulation of cyclin G in human breast cancer and its specific localization at replication foci in response to DNA damage in p53+/+ cells. J. Biol. Chem. 1999, 274:11022-11029.
153.Murdock, D.G et al: Up-regulation of nuclear and mitochondrial genes in the skeletal muscle of mice lacking the heart/muscle isoform of the adenine nucleotide translocator. J. Biol. Chem. 1999, 274:14429-14433.
154.Kaiser, A. et al: All-trans-retinoic acid-mediated growth inhibition involves inhibition of human kinesin-related protein HsEg5. J. Biol. Chem. 1999, 274:18925-18931.
155.Taylor, C.T. et al: Critical role of cAMP response element binding protein expression in Hypoxia-elicited induction of epithelial tumor necrosis factor-a. J. Biol. Chem. 1999, 274:19447-19454.
156.Hollnagel, A. et al: Id genes are direct targets of bone morphogenetic protein induction in embryonic stem cells. J. Biol. Chem. 1999, 274:19838-19845.
157.Chen, D. et al: Cloning and uterus/oviduct-specific expression of a novel estrogen-regulated gene (ERG1). J. Biol. Chem. 1999, 274:32215-32224.
158.Akiyama, H. et al: Molecular cloning and biological activity of a novel Ha-Ras suppressor gene predominantly expressed in skeletal muscle, heart, brain, and bone marrow by differential display using clonal mouse EC cells, ATDC5. J. Biol. Chem. 1999, 274:32192-32197.
158.Akiyama, H. et al: Molecular cloning and biological activity of a novel Ha-Ras suppressor gene predominantly expressed in skeletal muscle, heart, brain, and bone marrow by differential display using clonal mouse EC cells, ATDC5. J. Biol. Chem. 1999, 274:32192-32197.
159.Dieudonne, S.C. et al: Differential display of human marrow stromal cells reveals unique mRNA expression patterns in response to dexamethasone. J. Cellular Biochemistry. 1999, 76:231-243.
160.Blau, J. and Young, M.W.: Cycling vrille expression is required for a functional Drosophila clock. Cell. 1999, 99:661-671.
161.Duan, H. et al: SAG, a novel zinc RING finger protein that protects cells from apoptosis induced by redox agents. Mol. Cell. Biol. 1999, 19:3145-3155.
162.Tang, S.Q. et al: Enhancement of endothelial cell migration and in vitro tube formation by TAP20, a novel beta 5 integrin-modulating, PKC theta-dependent protein. J. Cell Biology. 1999, 147:1073-1083.
163.Xu. B. et al: Identification of a stress-induced protein during human trophoblast differentiation by differential display analysis. Biol. Reproduction. 1999, 61:681-686.
164.Zibara, K. et al: Identification and cloning of a new gene (2A3-2), homologous to human translational elongation factor, upregulated in a proliferating rat smooth muscle cell line and in carotid hyperplasia. Arterioscler, Thromb. & Vasc. Biol. 1999, 19:1650-1657.
165.Yang, D. et al: Viral myocarditis: identification of five differentially expressed genes in coxsackievirus B3-infected mouse heart. Circulation Research. 1999, 84:704-712.
166.Rittner, H.L. et al: Tissue-destructive macrophages in giant cell arteritis. Circulation Research. 1999, 84:1050-1058.
167.Weiler, S.R. et al: D3: A gene induced during myeloid cell differentiation of Linlo c-Kit+ Sca-1+ progenitor cells. Blood. 1999, 93:527-536.
168.Walden, P.D. et al: Mitogenic activation of human prostate-derived fibromuscular stromal cells by bradykinin. British J. Pharmacology. 1999, 127:220-226.
169.Thrash-Bingham, C.A. and Tartof, K.D.: aHIF: A natural antisense transcript overexpressed in human renal cancer and during hypoxia. J. Natl. Cancer Inst. 1999, 91:a143-a151.
170.Schneider, T.J. et al: A novel gene coding for a Fas apoptosis inhibitory molecule (FAIM) isolated from inducibly Fas-resistant B lymphocytes. J. Experimental Medicine. 1999, 189:949-956.
171.Trenkle, T. et al: Differential display probes for cDNA arrays. BioTechniques. 1999, 27:554-564.
172.OŐHara, B.F. et al: Gene expression in the brain across the hibernation cycle. Journal of Neuroscience. 1999, 19:3781-3790.
173.Gomi, H. et al: Learning induces a CDC2-related protein kinase, KKIAMRE. Journal of Neuroscience. 1999, 19:9530-9537.
174.Hisamatsu, T. et al: Interferon-inducible gene family 1-8U expression in colitis-associated colon cancer and severely inflamed mucosa in ulcerative colitis. Cancer Research. 1999, 59:5927-5931.
175.Fournier, M.V. et al: Identification of a gene encoding a human oxysterol-binding protein-homologue: a potential general molecular marker for blood dissemination of solid tumors. Cancer Research. 1999, 59:3748-3753.
176.Bussemakers, M.J.G. et al: DD3: A new prostate-specific gene, highly overexpressed in Prostate Cancer. Cancer Research. 1999, 59:5975-5979.
177.Krebs, C.J. et al: The 70-kDa heat shock cognate protein (Hsc73) gene is enhanced by ovarian hormones in the ventromedial hypothalamus. Proc. Natl. Acad. Sci. USA. 1999, 96:1686-1691.
178.Park, B.-W. et al: Induction of the Tat-binding protein 1 gene accompanies the disabling of oncogenic erbB receptor tyrosine kinases. Proc. Natl. Acad. Sci. USA. 1999, 96:6434-6438.
179.Garcia-Domingo, D. et al: DIO-1 is a gene involved in onset of apoptosis in vitro, whose misexpression disrupts development. Proc. Natl. Acad. Sci. USA. 1999, 96:7992-7997.
180.Cmarik, J.L. et al: Differentially expressed protein Pdcd4 inhibits tumor promoter-induced neoplastic transformation. Proc. Natl. Acad. Sci. USA 1999, 96:14037-14042.
181.Lo, P.-K. et al: Identification of a novel mouse p53 target gene DDA3. Oncogene. 1999, 18:7765-7774.
182.Wang, J.-F. et al: Differential display PCR reveals novel targets for the mood-stabilizing drug valproate including the molecular chaperone GRP78. Mol. Pharmacology. 1999, 55:521-527.
183.Miura, N. et al: Protective effects of triterpene compounds against the cytotoxicity of cadmium in HepG2 cells. Mol. Pharmacology. 1999, 56:1324-1328.
184.Welch, E.M. and Jacobson, A.: An internal open reading frame triggers nonsense-mediated decay of the yeast SPT10 mRNA. The EMBO Journal. 1999, 18:6134-6145.
185.Lurton, J. et al: Isolation of a gene product expressed by a subpopulation of human lung fibroblasts by Differential Display. American J. Respiratory Cell & Mol. Biol. 1999, 20:327-331.
186.Holthofer, H. et al: Altered gene expression and functions of mitochondria in human nephrotic syndrome. The FASEB Journal. 1999, 13:523-532.
187.Rajeevan, M.S. et al: Chemiluminescent analysis of gene expression on high-density filter arrays. J. Histochemistry & Cytochemistry. 1999, 47:337-342.
188.Zhang, S. et al: MGA2 or SPT23 is required for transcription of the d9 fatty acid desaturase gene, OLE1, and nuclear membrane integrity in Saccharomyces cerevisiae. Genetics. 1999, 151:473-483.
189.Ahlers, C. et al: Cyclosporin A inhibits Ca2+-mediated upregulation of the DNA repair enzyme DNA polymerase b in human peripheral blood mononuclear cells. European J. Biochem. 1999, 264:952-959.
190.Le Poole, I.C. et al: Altered gene expression in melanocytes exposed to 4-tertiary butyl phenol (4-TBP): upregulation of the A2b adenosine receptor. J. Invest. Dermatology. 1999, 113:725-731.
191.Liu, H. et al: Isolation of 10 differentially expressed cDNAs in differentiated Neuro2a cells induced through controlled expression of the GD3 synthase gene. J. Neurochemistry. 1999, 72:1781-1790.
192.Gomes, I. et al: A proline- and glutamine-rich protein promotes apoptosis in neuronal cells. J. Neurochemistry. 1999, 73:612-622.
192.Gomes, I. et al: A proline- and glutamine-rich protein promotes apoptosis in neuronal cells. J. Neurochemistry. 1999, 73:612-622.
193.Brenner, Sydney: Sillycon valley fever. Current Biology. 1999, 9:R671.
194.Richmond, C.S. et al: Genome-wide expression profiling in Escherichia coli K-12. Nucleic Acids Res. 1999, 27:3821-3835.
195.Chen, D. et al: Potential regulation of membrane trafficking by estrogen receptor via induction of Rab11 in uterine glands during implantation. Mol. Endocrinology. 1999, 13:993-1004.
196.Chen, G. et al: The mood-stabilizing agents lithium and valproate robustlIncrease the levels of the neuroprotective protein bcl-2 in the CNS. J. Neurochemistry. 1999, 72:879-882.
197.Singh, K. et al: Myocardial osteopontin expression coincides with the development of heart failure. Hypertension. 1999, 33:663-670.
198.Soo, C. et al: Cutaneous rat wounds express c49a, a novel gene with homology to the human melanoma differentiation associated gene, mda-7. J. Cellular Biochemistry. 1999, 74:1-10.
199.Basse, C.W. et al: Characterization of a Ustilago maydis gene specifically induced during the biotrophic phase: Evidence for negative as well as positive regulation. Mol. Cell. Biol. 2000, 20:329-339.
200.Mai, B. and Breeden, L.: CLN1 and its repression by Xbp1 are important for the efficient sporulation in budding yeast. Mol. Cell. Biol. 2000, 20:478-487.
201.Tanaka, H. et al: A ribonucleotide reductase gene involved in a p53-dependent cell-cycle checkpoint for DNA damage. Nature. 2000, 404:42-49.
202.Shaw, P.J. et al: Correlates of sleep and waking in Drosophila melanogaster. Science. 2000, 287:1834-1837.
203.Antonio, C. et al: Xkid, a chromokinesin required for chromosome alignment on the metaphase plate. Cell. 2000, 102:425-435.
204.Taroncher-Oldenburg, G. and Anderson, D.M.: Identification and characterization of three differentially expressed genes, encoding S-adenosylhomocysteine hydrolase, methionine aminopeptidase, and a histone-like protein, in the toxic dinoflagellate Alexandrium fundyenase. Applied and Environmental Microbiology. 2000, 66:2105-2112.
205.Qiu F.-H. et al: IMP and AMP deaminase in reperfusion injury down-regulates neutrophil recruitment. Proc. Natl. Acad. Sci. USA. 2000, 97:4267-4272.
206.Krebs, C.J. et al: A membrane-associated progesterone-binding protein, 25-Dx, is regulated by progesterone in brain regions involved in female reproductive behaviors. Proc. Natl. Acad. Sci. USA. 2000, 97:12816-12821.
207.Bosch, I. et al: Identification of differentially expressed genes from limited amounts of RNA. Nucleic Acids Res. 2000, 28:e27.
208.Chen, H.-M. et al: AZU-1: A candidate breast tumor suppressor and biomarker for tumor progression. Mol. Biol. of the Cell. 2000, 11:1357-1367.
209.Chan, J.R. et al: Progesterone synthesized by Schwann cells during myelin formation regulates neuronal gene expression. Mol. Biol. of the Cell. 2000, 11:2283-2295.
210.Casselman, A.L. et al: Determining the physical limits of the Brassica S locus by recombinational analysis. The Plant Cell. 2000, 12:23-34.
211.Klueva, N.Y. et al: Genetic variability and molecular responses of root penetration in cotton. Plant Science. 2000, 155:41-47.
212.Wei, J.-Z. et al: Characterization of salt-induced changes in gene expression in tomato (Lycopersicon esculentum) roots and the role played by abscisic acid. Plant Science. 2000, 159:135-148.
213.Brzostowicz, P.C. et al: Simultaneous identification of two cyclohexanone oxidation genes from an environmental Brevibacterium isolate using mRNA differential display. J. Bacteriology. 2000, 182:4241-4248.
214.Espey, L.L. et al: Induction of early growth response protein-1 gene expression in the rat ovary in response to an ovulatory dose of human chorionic gonadotropin. Endocrinology. 2000, 141:2385-2391.
215.Yoshioka, S. et al: Expression of tumor necrosis factor-stimulated gene-6 in the rat ovary in response to an ovulatory dose of gonadotropin. Endocrinology. 2000, 41:4114-4119.
216.Espey, L.L. et al: Characterization of ovarian carbonyl reductase gene expression during ovulation in the gonadotropin-primed immature rat. Biol. Reproduction. 2000, 62:390-397.
217.Bobe, J. and Goetz, F.W.: A tumor necrosis factor decoy homologue is up-regulated in the brook trout (Salvelinus fontinalis) ovary at the completion of ovulation. Biol. Reproduction. 2000, 62:420-426.
218.Espey, L.L. et al: Ovarian expression of a disintegrin and metalloproteinase with thrombospondin motifs during ovulation in the gonadotropin-primed immature rat. Biol. Reproduction. 2000, 62:1090-1095.
219.Ujioka, T. et al: Expression of regulator of G-protein signaling protein-2 in the rat ovary at the time of ovulation. Biol. Reproduction. 2000, 63:1513-1517.
220.Schmidt, J.V. et al: The Dlk1 and Gtl2 genes are linked and reciprocally imprinted. Genes & Development. 2000, 14:1997-2002.
221.Xie, Q. et al: Arabidopsis NAC1 transduces auxin signal downstream of TIR1 to promote lateral root development. Genes & Development. 2000, 14:3024-3036.
222.Sturtevant, Joy: Applications of differential display reverse transcription-PCR to molecular pathogenesis and medical mycology. Clinical Microbiology Reviews. 2000, 13:408-427.
223.Aghoram, K. et al: Abg1: A novel gene up-regulated by abscisic acid in guard cells of Vicia faba. J. Experimental Botany. 2000, 51:1479-1480.
224.Chinoy, M.R. et al: Dexamethasone enhances ras-recision gene expression in cultured murine fetal lungs: role in development. Am. J. Physiol: Lung Cell. & Molec. Physiol. 2000, 279:312L-318L.
225.Tang, X. et al: Down-regulation of GATA-2 transcription during Pneumocystis carinii infection. Infection and Immunity. 2000, 68:4720-4724.
226.Tanaka, T. et al: Expression of stress-response and cell proliferation genes in renal cell carcinoma induced by oxidative stress. American Journal of Pathology. 2000, 156:2149-2157.
227.Hashimoto, M. et al: Isolation and localization of type IIb Na/Pi cotransporter in the developing rat lung. American Journal of Pathology. 2000, 157:21-27.
228.Zhang, Z. and DuBois, R.N.: Par-4, a proapoptotic gene, is regulated by NSAIDs in human colon carcinoma cells. Gastroenterology. 2000, 118:1012-1017.
229.Zhang, M. et al: Light ethanol consumption enhances liver regeneration after partial hepatectomy in rats. Gastroenterology. 2000, 118:1333-1339.
230.Fujii, S. et al: Differential expression of neuroendocrine-specific protein in form-deprived chick eyes. Invest. Ophthalmology & Vis. Sci. 2000, 41:1533-1541.
230.Fujii, S. et al: Differential expression of neuroendocrine-specific protein in form-deprived chick eyes. Invest. Ophthalmology & Vis. Sci. 2000, 41:1533-1541.
231.Feldkaemper, M.P. et al: Changes in retinal and choroidal gene expression during development of refractive errors in chicks. Invest. Ophthalmology & Vis. Sci. 2000, 41:1623-1628.
231.Feldkaemper, M.P. et al: Changes in retinal and choroidal gene expression during development of refractive errors in chicks. Invest. Ophthalmology & Vis. Sci. 2000, 41:1623-1628.
232.Dowling, A.L.S. et al: Acute changes in maternal thyroid hormone induce rapid and transient changes in gene expression in fetal rat brain. Journal of Neuroscience. 2000, 20:2255-2265
232.Dowling, A.L.S. et al: Acute changes in maternal thyroid hormone induce rapid and transient changes in gene expression in fetal rat brain. Journal of Neuroscience. 2000, 20:2255-2265
233.Foca, C. et al: Identification and partial characterization of differentially expressed mRNAs in normal human endometria and endometrial carcinomas by differential display RT-PCR. Molecular Human Reproduction. 2000, 6:712-718.
234.Fritsche, J. et al: Molecular cloning and characterization of a human metalloprotease disintegrin - a novel marker for dendritic cell differentiation. Blood. 2000, 96:732-739.
235.Bobe, J. and Goetz, F.W.: A S100 homologue mRNA isolated by differential display PCR is down-regulated in the brook trout (Salvelinus fontinalis) post-ovulatory ovary. Gene. 2000, 257:187-194.
236.Mźller, J. et al: Disaccharide-mediated regulation of sucrose:fructan-6-fructosyltransferase, a key enzyme of fructan synthesis in barley leaves. Plant Physiology. 2000, 123:265-274.
237.Taybi, T. et al: A minimal serine/threonine protein kinase circadianly regulates phosphoenol pyruvate carboxylase activity in crassulacean acid metabolism-induced leaves of the common ice plant. Plant Physiology. 2000, 123:1471-1482.
238.Denisenko-Nehrbass, N.I. et al: Site-specific retinoic acid production in the brain of adult songbirds. Neuron. 2000, 27:359-370.
239.Lin, Y. et al: Pidd, a new death-domain-containing protein, is induced by p53 and promotes apoptosis. Nature Genetics. 2000, 26:124-127.
240.Darden, D.L. et al: RNA differential display of scarless wound healing in fetal rabbit indicates downregulation of a CCT chaperonin subunit and upregulation of a glycophorin-like gene transcript. J. Pediatric Surgery. 2000, 35:406-419.
241.Li, H.S. et al: Prostaglandin EP4 receptor mRNA is overexpressed in fetal rabbit skin wound. Archives of Otolaryngology-Head and Neck Surgery. 2000, 126:1337-1343.
242.Taylor, G.A. et al: Regulation of P311 expression by Met-hepatocyte growth factor/scatter factor and the ubiquitin/proteasome system. J. Biol. Chem. 2000, 275:4215-4219.
242.Taylor, G.A. et al: Regulation of P311 expression by Met-hepatocyte growth factor/scatter factor and the ubiquitin/proteasome system. J. Biol. Chem. 2000, 275:4215-4219.
243.Ohki, R. et al: Reprimo, a new candidate mediator of the p53-mediated cell cycle arrest at the G(2) phase J. Biol. Chem. 2000, 275:22627-22630.
244.Hu, Q. and Maity, S.N.: Stable expression of a dominant negative mutant of CCAAT binding factor/NF-Y in mouse fibroblast cells resulting in retardation of cell growth and inhibition of transcription of various cellular genes. J. Biol. Chem. 2000, 275:4435-4444.
245.Li, X.-L. et al: RNase-L-dependent destabilization of interferon-induced mRNAs - A role for the 2-5A system in attenuation of the interferon response. J. Biol. Chem. 2000, 275:8880-8888.
246.Venkateswaran, A. et al: Human white/murine ABC8 mRNA levels are highly induced in lipid-loaded macrophages - A transcriptional role for specific oxysterols. J. Biol. Chem. 2000, 275:14700-14707.
247.Zhao, L. et al: Transient induction of ENC-1, a kelch-related actin-binding protein, is required for adipocyte differentiation. J. Biol. Chem. 2000, 275:16845-16850.
248.Courilleau, D. et al: B-ind1, a novel mediator of Rac1 signaling cloned from sodium butyrate-treated fibroblasts. J. Biol. Chem. 2000, 275:17344-17348.
249.Li, P.-X. et al: Placental transforming growth factor-b is a downstream mediator of the growth arrest and apoptotic response of tumor cells to DNA damage and p53 overexpression. J. Biol. Chem. 2000, 275:20127-20135.
250.Zhang, R. et al: Identification of a novel ligand-receptor pair constitutively activated by Ras oncogenes. J. Biol. Chem. 2000, 275:24436-24443.
251.Haertel-Wiesmann, M. et al: Regulation of cyclooxygenease-2 and periostin by Wnt-3 in mouse mammary epithelial cells. J. Biol. Chem. 2000, 275:32046-32051.
252.Wu, H. et al: Autocrine gastrins in colon cancer cells up-regulate cytochrome c oxidase Vb and down-regulate efflux of cytochrome c and activation of caspase-3. J. Biol. Chem. 2000, 275:32491-32498.
253.Gu, Z. et al: ei24, a p53 response gene involved in growth suppression and apoptosis. Mol. Cell. Biol. 2000, 20:233-241.
254.Liang, P..: Gene discovery using Differential Display. Genetic Engineering News. 2000, 20:37.
255.Mir, K. U.: The hypothesis is there is no hypothesis. Trends in Genetics. 2000, 16:63-64.
256.Wooster, R.: Cancer classification with DNA microarrays, is less more? Trends in Genetics. 2000, 16:327-329.
257.Oda, E.,et al: Noxa, a BH3-only member of the Bcl-2 family and candidate mediator of p53-induced apoptosis. Science 2000, 288:1053-1058.
257.Oda, E.,et al: Noxa, a BH3-only member of the Bcl-2 family and candidate mediator of p53-induced apoptosis. Science. 2000, 288:1053-1058.
258.Wang, D. et al: MGSA/GRO-mediated melanocyte transformation involves induction of Ras expression. Oncogene. 2000, 19:4647-4659.
259.Frederick, M.J. et al: In vivo expression of the novel CXC chemokine BRAK in normal and cancerous human tissue. American Journal of Pathology. 2000, 156:1937-1950.
260.Sheikh-Hamad, D. et al: Regulation of stanniocalcin in MDCK cells by hypertonicity and extracellular calcium. Am. J. Physiol: Renal Physiology. 2000, 278:F417-424.
261.Deininger, M.W.N. et al: BCR-ABL tyrosine kinase activity regulates the expression of multiple genes implicated in the pathogenesis of chronic myeloid leukemia. Cancer Research. 2000, 60:2049-2055.
262.Attur, M.G. et al: Functional genomic analysis in arthritis-affected cartilage: yin-yang regulation of inflammatory mediators by a5§1 and aV§3 integrins. J. Immunolgy. 2000, 164:2684-2691.
263.Bueno, R. et al: The a folate receptor is highly activated in malignant pleural mesothelioma. J. Thoracic & Cardiovascular Surgery. 2001, 121:225-233.
264.Cho, Y.-J. et al: Multicolor fluorescent differential display. BioTechniques. 2001, 30:562-572.
265.Gibbs, W. W.: Shrinking to enormity: DNA microarrays are reshaping basic biology-but scientists fear they may soon drown in the data. Scientific American. 2001, 284:33-34.
266.Marshall, E.: Affymetrix settles suit, fixes mouse chips. Science. 2001, 291:2535.
267.Mills, J.C. et al: DNA microarrays and beyond: completing the journey from tissue to cell. Nature Cell Biology. 2001, 8:E175-178.
268.Goryachev, A.B. et al: Unfolding of microarray data. J Comput. Biol. 2001, 8:443-461.
269.King, H.C. and A. A. Sinha.: Gene expression profile analysis by DNA microarrays: promise and pitfalls. JAMA. 2001, 14:286(18):2280-2288.
270.Knight, J.: When the chips are down. Nature. 2001, 410:860-861.
271.Knight, J.: GenticistsŐ work in disarray as DNA-chip producer pulls the plug. Nature. 2001, 414:135-136.
272.Ramdas, L. et al: Sources of nonlinearity in cDNA microarray expression measurements. Genome Biology. 2001, 2:Research0047.
273.Eisenhofer, G. et al: Pheochromocytomas in von Hippel-Lindau Syndrome and multiple endocrine neoplasia type 2 display distinct biochemical and clinical phenotypes. J. Clin. Endocrinology & Metabolism. 2001, 86:1999-2008.
274.Kumar, S. et al: Messenger ribonucleic acid encoding interferon-inducible guanylate binding protein 1 is induced in human endometrium within the putative window of implantation. J. Clin. Endocrinology & Metabolism. 2001, 86:2420-2427
275.DeGregorio-Rocasolano, N. et al: Overexpression of neuronal pentraxin 1 is involved in neuronal death evoked by low K+ in cerebellar granule cells. J. Biol. Chem. 2001, 276:796-803.
276.Nechiporuk, T et al: ETL, a novel seven-transmembrane receptor that is developmentally regulated in the heart. ETL is a member of the secretin family and belongs to the epidermal growth factor-seven-transmembrane subfamily. J. Biol. Chem. 2001, 276: 4150-4157.
277.Jheon, A.H. et al: Characterization of a novel KRAB/C2H2 zinc finger transcription factor involved in bone development. J. Biol. Chem. 2001, 276:18282-18289.
278.Moriwaki, Y. et al: Mycobacterium bovis Bacillus calmette-guerin and its cell wall complex induce a novel lysosomal membrane protein, SIMPLE, that bridges the missing link between lipopolysaccharide and p53-inducible Gene, LITAF(PIG7), and estrogen-inducible gene, EET-1. J. Biol. Chem. 2001, 276:23065-23076.
279.Huang, W. et al: The nucleolar phosphoprotein B23 interacts with hepatitis delta antigens and modulates the hepatitis delta virus RNA replication. J. Biol. Chem. 2001, 276:25166-25175.
280.Spradling, K.D. et al: Epsin 3 is a novel extracellular matrix-induced transcript specific to wounded epithelia. J. Biol. Chem. 2001, 276:29257-29267.
281.Hosoda, T. et al: A novel myocyte-specific gene Midori promotes the differentiation of P19CL6 cells into cardiomyocytes. J. Biol. Chem. 2001, 276:35978-35989.
282.Lo, P. et al: Identification of a mouse thiamine transporter gene as a direct transcriptional target for p53. J. Biol. Chem. 2001, 276:37186-37193.
283.Poligone, B. and Baldwin, A.S.: Positive and negative regulation of NF-kB by COX-2. Roles of different prostaglandins. J. Biol. Chem. 2001, 276:38658-38664.
284.Kearns, A.E. et al: Cloning and characterization of a novel protein kinase that impairs osteoblast differentiation in vitro. J. Biol. Chem. 2001, 276:42213-42218.
285.Gori, F. et al: Cloning and characterization of a novel WD-40 repeat protein that dramatically accelerates osteoblastic differentiation. J. Biol. Chem. 2001, 276:46515-46522.
286.Makino, T. et al: Hornerin, a novel profilaggrin-like protein and differentiation-specific marker isolated from mouse skin. J. Biol. Chem. 2001, 276:47445-47452.
287.Karumanchi, S.A. et al: VHL tumor suppressor regulates Cl-/HCO3- exchange and Na+/H+ exchange activities in renal carcinoma cells. Physiological Genomics. 2001, 5:119-128.
288.Li, H. et al: Rat mitochondrial ATP synthase ATP5G3: cloning and upregulation in pancreas after chronic ethanol feeding. Physiological Genomics. 2001, 6:91-98.
289.Ngimbous, B.B. et al: Heart transplantation changes the expression of distinct gene families. Physiological Genomics. 2001, 7:115-126.
290.Jhaveri, M.S. et al: Impact of extracellular folate levels on global gene expression. Mol. Pharmacology. 2001, 60:1288-1295.
291.Sahir, N. et al: Caffeine-induced telencephalic vesicle evagination in early post-implantation mouse embryos involves cAMP-dependent protein kinase (PKA) inhibition. Cerebral Cortex. 2001, 11:343-349.
292.Smith, B.A. et al: Identification of genes involved in human urothelial cell-matrix interactions: implications for the progression pathways of malignant urothelium. Cancer Research. 2001, 61:1678-1685.
293.Hsu, N. et al: Overexpression of dihydrodiol dehydrogenase as a prognostic marker of non-small cell lung cancer. Cancer Research. 2001, 61:2727-2731.
294.Mariani, L. et al: Identification and validation of P311 as a glioblastoma invasion gene using laser capture microdissection. Cancer Research. 2001, 61:4190-4196.
295.Shridhar, V. et al: Loss of expression of a new member of the DNAJ protein family confers resistance to chemotherapeutic agents used in the treatment of ovarian cancer. Cancer Research. 2001, 61:4258-4265.
296.Dong, G. et al: Molecular profiling of transformed and metastatic murine squamous carcinoma cells by differential display and cDNA microarray reveals altered expression of multiple genes related to growth, apoptosis, angiogenesis, and the NF-B signal pathway. Cancer Research. 2001, 61:4797-4808.
297.Matsuyama, A. et al: Hepatoma-derived growth factor is associated with reduced sensitivity to irradiation in esophageal cancer. Cancer Research. 2001, 61:5714-5717.
298.Segawa, N. et al: Phosphorylation of mitogen-activated protein kinase is inhibited by calcitonin in DU145 prostate cancer cells. Cancer Research. 2001, 61:6060-6063.
299.Luker, K.E. et al: Overexpression of IRF9 confers resistance to antimicrotubule agents in breast cancer cells. Cancer Research. 2001, 61:6540-6547.
300.Chung, J. et al: Novel transmembrane GTPase of non-small cell lung cancer identified by mRNA differential display. Cancer Research. 2001, 61:8873-8879.
301.Thakker-Varia, S. et al: Rab3A is required for brain-derived neurotrophic factor-induced synaptic plasticity: transcriptional analysis at the population and single-cell levels. J. Neurosciences. 2001, 21:6782-6790.
302.Corominola, H. et al: Identification of novel genes differentially expressed in omental fat of obese subjects and obese type 2 diabetic patients. Diabetes. 2001, 50:2822-2830.
303.Liu, Y. et al: The matrix metalloproteinase gene GmMMP2 is activated in response to pathogenic infections in soybean. Plant Physiology. 2001, 127:1788-1797.
304.Liu, J. et al: Isolation of a CONSTANS ortholog from Pharbitis nil and its role in flowering. Plant Physiology. 2001, 125:1821-1830.
305.Kinoshita, S. et al: A novel heat stress-responsive gene in the marine diatom Chaetoceros compressum encoding two types of transcripts, a trypsin-like protease and its related protein, by alternative RNA splicing. European J. Biochem. 2001, 268:4599-4609.
306.Dunaeva, M. and Adamska, I.: Identification of genes expressed in response to light stress in leaves of Arabidopsis thaliana using RNA differential display. European J. Biochem. 2001, 268:5521-5529.
307.Silverman, M.D. et al: Cell adhesion molecule expression in cultured human iris endothelial cells. Invest. Ophthalmology & Vis. Sci. 2001, 42:2861-2866.
308.Weterings, K. et al: Regional localization of suspensor mRNAs during early embryo development. Plant Cell. 2001, 13:2409-2425.
309.Hanna, M.N. et al: uvrA is an acid-inducible gene involved in the adaptive response to low pH in Streptococcus mutans. J. Bacteriology. 2001, 183:5964-5973.
310.Guenzi, E. et al: The helical domain of GBP-1 mediates the inhibition of endothelial cell proliferation by inflammatory cytokines. EMBO J. 2001, 20:5568-5577.
311.Lacy, H.M. and Sanderson, R.D.: Sperm protein 17 is expressed on normal and malignant lymphocytes and promotes heparan sulfate-mediated cell-cell adhesion. Blood. 2001, 98:2160-2165.
312.Gregorio-King, C.C. et al: ORP-3, a human oxysterol-binding protein gene differentially expressed in hematopoietic cells. Blood. 2001, 98:2279-2281.
313.Yamada, T. et al: Lineage switch induced by overexpression of Ets family transcription factor PU.1 in murine erythroleukemia cells. Blood. 2001, 97:2300-2307.
314.Lievens, S. et al: A critical evaluation of differential display as a tool to identify genes involved in legume nodulation: looking back and looking forward. Nucleic Acids Res. 2001, 29:3459-3468.
315.Thai, S. et al: Detection of early gene expression changes by differential display in the livers of mice exposed to dichloroacetic acid. Carcinogenesis. 2001, 22:1317-1322.
316.Bell, S.E. et al: Differential gene expression during capillary morphogenesis in 3D collagen matrices: regulated expression of genes involved in basement membrane matrix assembly, cell cycle progression, cellular differentiation and G-protein signaling. J. Cell Science. 2001, 114:2755-2773.
317.Yiu, G.K. et al: SPARC (Secreted Protein Acidic and Rich in Cysteine) induces apoptosis in ovarian cancer cells. American Journal of Pathology. 2001, 159:609-622.
318.Doi, M. et al: Light-induced phase-delay of the chicken pineal circadian clock is associated with the induction of cE4bp4, a potential transcriptional repressor of cPer2 gene. Proc. Natl. Acad. Sci. USA. 2001, 98:8089-8094.
318.Doi, M. et al: Light-induced phase-delay of the chicken pineal circadian clock is associated with the induction of cE4bp4, a potential transcriptional repressor of cPer2 gene. Proc. Natl. Acad. Sci. USA. 2001, 98:8089-8094.
319.Harris, H.A. et al: Regulation of metallothionein II messenger ribonucleic acid measures exogenous estrogen receptor-§ activity in SAOS-2 and LNCaPLN3 cells. Endocrinology. 2001, 142:645-652.
320.Huynh, H. et al: Induction of UO-44 gene expression by tamoxifen in the rat uterus and ovary. Endocrinology. 2001, 142:2985-2995.
321.Huynh, H. et al: Cloning and characterization of a novel pregnancy-induced growth inhibitor in mammary gland. Endocrinology. 2001, 142:3607-3615
322.Espey, L.L. et al: 3-Hydroxysteroid dehydrogenase messenger RNA transcription in the immature rat ovary in response to an ovulatory dose of gonadotropin. Biol. Reproduction. 2001;65:72-78.
323.Edgar, A.J. et al: Cloning of dexamethasone-induced transcript : a novel glucocorticoid-induced gene that is upregulated in emphysema. Am. J. Respiratory Cell Molecular Biology. 2001, 25:119-124.
324.Kretzler, M. et al: Integrin linked kinase as a candidate downstream effector in proteinuria. FASEB J. 2001, 10.1096/fj.00-0832fje.
325.Minami, N. et al: Analysis of gene expression in mouse 2-cell embryos using fluorescein differential display: comparison of culture environments. Biol. Reproduction. 2001, 64:30-35.
326.Bobe, J. and Goetz, F.W.: An ovarian progastricsin is present in the trout coelomic fluid after ovulation. Biol. Reproduction. 2001, 64:1048-1055.
327.Iida, H. et al: Spermatid-specific expression of Iba1, an ionized calcium binding adapter molecule-1, in rat testis. Biol. Reproduction. 2001, 64:1138-1146.
328.Ma, J. et al: Regulation of zygotic gene activation in the preimplantation mouse embryo: global activation and repression of gene expression. Biol. Reproduction. 2001, 64:1713-1721.
329.Robert, C. et al: Differential display and suppressive subtractive hybridization used to identify granulosa cell messenger RNA associated with bovine oocyte developmental competence. Biol. Reproduction. 2001, 64:1812-1820.
330.Boulday, G. et al: Antigraft antibody-mediated expression of metalloproteinases on endothelial cells : differential expression of TIMP-1 and ADAM-10 depends on antibody specificity and isotype. Circulation Research. 2001, 88:430-437.
331.Watakabe, A. et al: Growth/differentiation factor 7 is preferentially expressed in the primary motor area of the monkey neocortex. J. Neurochemistry. 2001, 76:1455-1464.
332.Sumi, S. et al: Isolation and characterization of the genes up-regulated in isolated neurons by aged garlic extract (AGE). J. Nutrition. 2001, 131:1096S-1099.
333.Mariani, L. et al: Death-associated Protein 3 (Dap-3) is overexpressed in invasive glioblastoma cells in vivo and in glioma cell lines with induced motility phenotype in vitro. Clinical Cancer Research. 2001, 7:2480-2489.
334.Shedden, K. and Cooper, S.: Analysis of cell-cycle-specific gene expression in human cells as determine by microarrays and double-thymidine block synchronization. Proc. Natl Acad. Sci. U.S.A. 2002, 99:4379-4384.
335.Liang P.: SAGE Genie: A suite with panoramic view of gene expression. Proc. Natl Acad. Sci. U.S.A. 2002, 99:11547-11548.
336.Liang P.: A decade of differential display. Biotechniques. 2002, 33:338-346.
337.Cooper, S.: Cell cycle analysis and microarrays. Trends in Genetics. 2002, 18:289-290.
338.Jenssen T.-K. et al: Analysis of repeatability in spotted cDNA microarrays. Nucleic Acids Res. 2002, 30:3235-3244.
339.Kuo, W.P. et al: Analysis of matched mRNA measurements from two different microarray technologies. Bioinformatics. 2002, 18:405-412.
340.Kothapalli, R. et al: Microarray results: how accurate are they? BMC Bioinformatics. 2002, 3:22.
341.Petricoin, E.F. et al: Medical applications of microarray technologies: a regulatory science perspective. Nature Genetics (supplement). 2002, 32:474-479.
342.Rousseau, S. et al: Inhibition of SAPK2a/p38 prevents hnRNP A0 phosphorylation by MAPKAP-K2 and its interaction with cytokine mRNAs. EMBO J. 2002, 21:6505-6514.
343.Jiao, X. et al: Identification of target messenger RNA substrates for the murine deleted in azoospermia-like RNA-binding protein. Biol. Reproduction. 2002, 66:475-485.
344.Torres, M.S.T. et al: Assessment and application of laser microdissection for analysis of gene expression in the rhesus monkey endometrium. Biol. Reproduction. 2002, 67:1067-1072.
345.Baran, N. et al: Characterization of a prolactin-regulated gene in reproductive tissues using the prolactin receptor knockout mouse model. Biol. Reproduction. 2002, 66:1210-1218.
346.Doiguchi, M. et al: Complementary DNA cloning and characterization of rat spergen-1, a spermatogenic cell-specific gene-1, containing a mitochondria-targeting signal. Biol. Reproduction. 2002, 66:1462-1470.
347.Espey, L.L. and Richards, J.S.: Temporal and spatial patterns of ovarian gene transcription following an ovulatory dose of gonadotropin in the rat. Biol. Reproduction. 2002, 67:1662-1670.
348.Wolf, G. et al: Angiotensin IIŐs antiproliferative effects mediated through AT2-receptors depend on down-regulation of SM-20. Laboratory Investigation. 2002, 82:1305-1317.
349.Kaserer, K. et al: Construction of cDNA libraries from microdissected benign and malignantthyroid tissue. Laboratory Investigation. 2002, 82:1707-1714.
350.Wang, M. et al: Interleukin 24 (MDA-7/MOB-5) signals through two heterodimeric receptors, IL-22R1/IL-20R2 and IL-20R1/IL-20R2. J. Biol. Chem. 2002, 277:7341-7347.
351.Deng, H.B. et al: Increased expression of dihydrodiol dehydrogenase induces resistance to cisplatin in human ovarian carcinoma cells. J. Biol. Chem. 2002, 277:15035-15043.
352.Christian, M. et al: Cyclic AMP-induced forkhead transcription factor, FKHR, cooperates with CCAAT/enhancer-binding protein b in differentiating human endometrial stromal cells. J. Biol. Chem. 2002, 277:20825-20832.
353.Chipuk, J.E. et al: Identification and characterization of a novel rat ov-serpin family member, trespin. J. Biol. Chem. 2002, 277:26412-26421.
354.Cunningham, S.A. et al: JAM2 interacts with a4b1, facilitation by JAM3. J. Biol. Chem. 2002, 277:27589-27592.
355.Kim, D. et al: GADD153-mediated anticancer effects of N-(4-hydroxyphenyl)retinamide on human hepatoma cells. J. Biol. Chem. 2002, 277:38930-38938.
356.McCudden, C.R. et al: Characterization of mammalian stanniocalcin receptors. Mitochondrial targeting of ligand and receptor for regulation of cellular metabolism. J. Biol. Chem. 2002, 277:45249-45258.
357.Mong, J.A. et al: Perspective: micoarrays and differential display PCRŃtools for studying transcript levels of genes in neuroendocrine systems. Endocrinology. 2002, 143:2002-2006.
357.Mong, J.A. et al: Perspective: micoarrays and differential display PCRŃtools for studying transcript levels of genes in neuroendocrine systems. Endocrinology. 2002, 143:2002-2006.
358.Brandt, B. et al: Early placenta insulin-like growth factor (pro-EPIL) is overexpressed and secreted by c-erbB-2-positive cells with high invasion potential. Cancer Research. 2002, 62:1020-1024.
359.Shekhar, M.P.V. et al: Rad6 overexpression induces multinucleation, centrosome amplification, abnormal mitosis, aneuploidy, and transformation. Cancer Research. 2002, 62:2115-2124.
360.Neef, R. et al: Identification of the human PHLDA1/TDAG51 gene: down-regulation in metastatic melanoma contributes to apoptosis resistance and growth deregulation. Cancer Research. 2002; 62:5920-5929.
361.Haddad, A. et al: New class of cargo protein in tetrahymena thermophila dense core secretory granules. Eukaryotic Cell. 2002, 1:583-593.
362.Yang, C.B. et al: Identification of Munc13-3 as a candidate gene for critical-period neuroplasticity in visual cortex. J. Neurosciences. 2002, 22:8614-8618.
363.GutiŽrrez-Pabello, J.A. et al: Upregulation of Thymosin §-10 by Mycobacterium bovis infection of bovine macrophages is associated with apoptosis. Infection and Immunity. 2002, 70:2121-2127.
364.Sebert, M.E. et al: Microarray-based identification of htrA, a Streptococcus pneumoniae gene that is regulated by the CiaRH two-component system and contributes to nasopharyngeal colonization. Infection and Immunity. 2002, 70:4059-4067.
365.Swords, W.E. et al: Acylation of the lipooligosaccharide of haemophilus influenzae and colonization: an htrB mutation diminishes the colonization of human airway epithelial cells. Infection and Immunity. 2002, 70:4661-4668.
366.Rude, T.H. et al: Relationship of the glyoxylate pathway to the pathogenesis of Cryptococcus neoformans. Infection and Immunity. 2002; 70:5684-5694.
367.Schultheis, B. et al: Overexpression of SOCS-2 in advanced stages of chronic myeloid leukemia: possible inadequacy of a negative feedback mechanism. Blood. 2002, 99:1766-1775.
368.Giraudier, S. et al: Overexpression of FKBP51 in idiopathic myelofibrosis regulates the growth factor independence of megakaryocyte progenitors. Blood. 2002, 100:2932-2940.
369.Balandin, T. and Castresana, C.: AtCOX17, an Arabidopsis homolog of the yeast copper chaperone COX17. Plant Physiology. 2002, 129:1852-1857.
370.Cheng, Q. et al: Identification of molecular markers for the early detection of human squamous cell carcinoma of the uterine cervix. British Journal of Cancer. 2002, 86:274-281.
371.Yoshida-Hiroi, M. et al: Chromaffin cell function and structure is impaired in corticotropin-releasing hormone receptor type 1-null mice. Molecular Psychiatry. 2002, 7:967-974.
372.Iqbal, M.J. et al: Differentially abundant mRNAs in rat liver in response to diets containing soy protein isolate. Physiological Genomics. 2002, 11:219-226.
373.Hell-Pourmojib, M. et al: Differential expression of a novel gene in response to hsp27 and cell differentiation in human keratinocytes. J. Invest. Dermatology. 2002, 119:154-159.
374.Cancino-D’az, J.C. et al: Interleukin-13 receptor in psoriatic keratinocytes: overexpression of the mRNA and underexpression of the protein. J. Invest. Dermatology. 2002, 119:1114-1120.
375.Sachidanandan, C. et al: Tristetraprolin and LPS-inducible CXC chemokine are rapidly induced in presumptive satellite cells in response to skeletal muscle injury. J. Cell Science. 2002, 115:2701-2712.
376.Nickenig, G. et al: Redox-sensitive vascular smooth muscle cell proliferation is mediated by GKLF and Id3 in vitro and in vivo. FASEB J. 2002, 16:1077-1086.
377.Gordon, G.J. et al: Inhibitor of apoptosis protein-1 promotes tumor cell survival in mesothelioma. Carcinogenesis. 2002, 23:1017-1024.
378.Rodriguez-Vargas, S. et al: Gene expression analysis of cold and freeze stress in baker's yeast. Applied and Environmental Microbiology. 2002, 68:3024-3030.
379.Utsunomiya, T. et al: G protein g7 expression as a new clinicopathological marker in patients with intrahepatic cholangiocarcinoma. Archives of Surgery. 2002, 137:181-185.
380.Hong, J. et al: Characterization of a cysteine proteinase inhibitor induced during neuronal cell differentiation. J. Neurochem. 2002, 81:922-934.
381.Walder, K. et al: Tanis: a link between type 2 diabetes and inflammation? Diabetes. 2002, 51:1859-1866.
382.Liu, S. et al: Down-regulation of Annexin A10 in hepatocellular carcinoma is associated with vascular invasion, early recurrence, and poor prognosis in synergy with p53 mutation. American Journal of Pathology. 2002, 160:1831-1837.
383.Steenbergen, R.D.M. et al: Down-regulation of GATA-3 expression during human papillomavirus-mediated immortalization and cervical carcinogenesis. American Journal of Pathology. 2002, 160:1945-1951.
384.Mueller, C. et al: Identification of a novel redox-sensitive gene, Id3, which mediates angiotensin IIĐinduced cell growth. Circulation. 2002, 105:2423-2428.
385.Hayama, R. et al: Isolation of rice genes possibly involved in the photoperiodic control of flowering by a fluorescent differential display method. Plant Cell Physiol. 2002, 43:494-504.
386.Ahola, T.M. et al: Progestin upregulates G-protein-coupled receptor 30 in breast cancer cells. European J. Biochem. 2002, 269:2485-2490.
387.Gabrilovich, D.I. et al: H1ˇ histone and differentiation of dendritic cells. A molecular target for tumor-derived factors. J. Leukoc. Biol. 2002, 72:285-296.
388.Richard, M. et al: The expression pattern of the ITIM-bearing lectin CLECSF6 in neutrophils suggests a key role in the control of inflammation. J. Leukoc. Biol. 2002, 71:871-880.
389.Wightman, J. et al: Retinoic acid-induced growth arrest and differentiation: retinoic acid up-regulates CD32 (FcgRII) expression, the ectopic expression of which retards the cell cycle. Mol. Cancer Therapeutics. 2002, 1:493-506.
390.Karakaya, H.C. et al: Molecular mapping of the fasciation mutation in soybean, Glycine max (Leguminosae). Am. J. Botany. 2002, 89:559-565.
391.Sukotjo, C. et al: Molecular cloning of Wound Inducible Transcript (wit 3.0) differentially expressed in edentulous oral mucosa undergoing tooth extraction wound-healing. J. Dental Research. 2002, 81:229-235.
392.Tsai, K.J. et al: sgk, a primary glucocorticoid-induced gene, facilitates memory consolidation of spatial learning in rats. Proc. Natl. Acad. Sci. USA. 2002, 99:3990-3995.
393.Valerius, M.T. et al: Hoxa 11 is upstream of integrin a8 expression in the developing kidney. Proc. Natl. Acad. Sci. USA. 2002, 99:8090-8095.
394.Vranov‡, E. et al: Comprehensive analysis of gene expression in Nicotiana tabacum leaves acclimated to oxidative stress. Proc. Natl. Acad. Sci. USA. 2002, 99:10870-10875.
395.Lefebvre, B. et al: Chromosomal integration of retinoic acid response elements prevents cooperative transcriptional activation by retinoic acid receptor and retinoid x receptor. Mol. Cell. Biol. 2002, 22:1446-1459.
396.Goodman, N.: Microarrays: Hazardous to your science. Genome Technology. 2003, 32:42-45.
397.Krochmal, M.: Cross platform, should researchers vanquish Venn diagrams? Genome Technology. 2003, 36:46.
398.Worms and science: An interview with Sydney Brenner. EMBO reports. 2003, 4:224-226.
399.Brenner, S.: The wormŐs turn. Current Biology. 2003, 12:R713.
400.Tilstone, C.: Vital statistics. Nature. 2003, 424:610-612.
401.Matsuoka, T. et al: Members of the large maf transcription family regulate insulin gene transcription in islet § cells. Mol. Cell. Biol. 2003, 23:6049-6062.
402.Nguyen, M.M. et al: Requirement of PDZ-containing proteins for cell cycle regulation and differentiation in the mouse lens epithelium. Mol. Cell. Biol. 2003, 23:8970-8981.
403.Keates, S.E. et al: Altered gene expression in three plant species in response to treatment with Nep1, a fungal protein that causes necrosis. Plant Physiology. 2003, 132:1610-1622.
404.Bogatcheva, N.V. et al: GREAT/LGR8 is the only receptor for insulin-like 3 peptide. Mol. Endocrinology. 2003, 17:2639-2646.
405.Warke, R.V. et al: Dengue virus induces novel changes in gene expression of human umbilical vein endothelial cells. J. Virology. 2003, 77:11822-11832.
406.Collett, H. et al: Photosynthetic genes are differentially transcribed during the dehydration-rehydration cycle in the resurrection plant, Xerophyta humilis. J. Experimental Botany. 2003, 54:2593-2595.
407.Iida, H. et al: Complementary DNA cloning and characterization of rat spergen-2, a spermatogenic cell-specific gene 2 encoding a 56-kilodalton nuclear protein bearing ankyrin repeat motifs. Biol. Reproduction. 2003, 69:421-429.
408.Okulicz, W.C. and Ace, C.I.: Temporal regulation of gene expression during the expected window of receptivity in the rhesus monkey endometrium. Biol. Reproduction. 2003, 69:1593-1599.
409.Baran, N. et al: Decysin, a new member of the metalloproteinase family, is regulated by prolactin and dteroids during mouse pregnancy. Biol. Reproduction. 2003, 68:1787-1792.
410.Espey, L.L. et al: Cells of the rat ovary during the periovulatory period. Biol. Reproduction. 2003, 68:1895-1902.
411.Luberto, C. et al: Identification of App1 as a regulator of phagocytosis and virulence of Cryptococcus neoformans. J. Clin. Invest. 2003, 112:1080-1094.
412.op den Camp, R.G.L. et al: Rapid induction of distinct stress responses after the release of singlet oxygen in Arabidopsis. Plant Cell. 2003, 15:2320-2332.
413.Mahloogi, H. et al: Overexpression of the calcium sensor visinin-like protein-1 leads to a cAMP-mediated decrease of in vivo and in vitro growth and invasiveness of squamous cell carcinoma Cells. Cancer Research. 2003, 63:4997-5004.
414.Delgado-Jarana, J. et al: Glucose uptake in Trichoderma harzianum: role of gtt1. Eukaryotic Cell. 2003, 2:708-717.
415.Gonzalez, H.E. et al: Identification of 9 genes differentially expressed in head and neck squamous cell carcinoma. Archives of Otolaryngology-Head and Neck Surgery. 2003, 129:754-759.
416.Unoki, H. et al: Up-regulation of cyr61 in vascular smooth muscle cells of spontaneously hypertensive rats. Laboratory Investigation. 2003, 83:973-982.
417.Liu, X. and Baird, W.V.: Differential expression of genes regulated in response to drought or salinity stress in sunflower. Crop Science. 2003, 43:678-687.
418.Thomas, J.M.G. et al: Elevated temperature and carbon dioxide effects on soybean seed composition and transcript abundance. Crop Science. 2003, 43:1548-1557.
419.Mirmohammadsadegh, A. et al: HAX-1, identified by differential display reverse transcription polymerase chain reaction, is overexpressed in lesional psoriasis. J. Invest. Dermatology. 2003, 120:945-1051.
420.Thorne, G.D. and Paul, R.J.: Effects of organ culture on arterial gene expression and hypoxic relaxation: role of the ryanodine receptor. Am. J. Physiol: Cell Physiology. 2003, 284:C999-1005.
421.Liu, X. and Baird, W.V.: The ribosomal small-subunit protein S28 gene from Helianthus annuus (Asteraceae) is down-regulated in response to drought, high salinity, and abscisic acid. Am. J. Botany. 2003, 90:526-531.
422.Toffaletti, D.L. et al: Regulation of cytochrome c oxidase subunit 1 (COX1) expression in Cryptococcus neoformans by temperature and host environment. Microbiology. 2003, 149:1041-1049.
423.Satake, H. et al: Genes modulated by expression of GD3 synthase in Chinese hamster ovary cells, evidence that the Tis21 gene is now involved in the induction of GD3 9-0-acetylation. J. Biol. Chem. 2003, 278:7942-7948.
424.Inagaki, T. et al: The retinoic acid-responsive proline-rich protein is identified in promyeloleukemic HL-60 cells. J. Biol. Chem. 2003, 278:51685-51692.
425.Villablanca, A.C. et al: Differential regulation of gene expression by ovariectomy in mouse aorta. Physiological Genomics. 2003, 12:175-185.
426.Moore, R.C. et al: Genetic and functional analysis of DD44, a sex-linked gene from the dioecious plant silene latifolia, provides clues to early events in sex chromosome evolution. Genetics. 2003, 163:321-334.
427.Thorne, G.D. and Paul, R.J.: Effects of organ culture on arterial gene expression and hypoxic relaxation: role of the ryanodine receptor. Am. J. Physiol: Lung Cell. & Molec. Physiol. 2003, 284:C999-1005.
428.P‡ez-Pereda, M. et al: Involvement of bone morphogenetic protein 4 (BMP-4) in pituitary prolactinoma pathogenesis through a Smad/estrogen receptor crosstalk. Proc. Natl. Acad. Sci. USA. 2003, 100:1034-1039.
429.Lemaire, F. et al: Differential expression profiling of head and neck squamous cell carcinoma (HNSCC). British Journal of Cancer. 2003, 89:1940-1949.
430.Kajimoto, Y. et al: Synapse-associated protein 90/postsynaptic density-95-associated protein (SAPAP) is expressed differentially in phencyclidine-treated rats and is increased in the nucleus accumbens of patients with schizophrenia. Neuropsychopharmacology. 2003, 28:1831-1839.
431.Ko, J. et al: Identification and differential expression of novel human cervical cancer oncogene HCCR-2 in human cancers and its involvement in p53 stabilization. Oncogene. 2003, 22:4679-4689.
432.Leng, R.P. et al: Pirh2, a p53-induced ubiquitin-protein ligase, promotes p53 degradation. Cell. 2003, 112:779-791.
433.Butowt, R. et al: A putative plastidic glucose translocator is expressed in heterotrophic tissues that do not contain starch, during olive (Olea europea L.) fruit ripening. Plant Cell Physiol. 2003, 44:1152-1161.
434.Chigira, S. et al: Increased expression of the huntingtin interacting protein-1 gene in cells from Hutchinson Gilford Syndrome (progeria) patients and aged donors. J. Gerontology Biol. Sci. Med. Sci. 2003, 58:B873-878.
435.El-Gedaily, A. et al: Constitutive and regulated expression of platelet basic protein in human monocytes. J. Leukoc. Biol. 2003, 10.1189-jlb.0603288.
436.Tran, H. et al: Modulation of the LDL receptor and LRP levels by HIV protease inhibitors. J. Lipid Research. 2003, 44:1859-1869.
437.Luo, Y. et al: Development of Nurr1 stable cell lines for the identification of downstream targets. Ann. N.Y. Acad. Sci. 2003, 991:354-358.
438.Beyer, C. et al: Regulation of gene expression in the developing midbrain by estrogen: implication of classical and nonclassical steroid signaling. Ann. N.Y. Acad. Sci. 2003, 1007:17-28.
439.Lee, Y.I. et al: Human hepatitis B virus-X protein alters mitochondrial function and physiology in human liver cells. J. Biol. Chem. 2004, 279:15460-15471.
440.Scobey, M.J. et al: The Id2 transcriptional repressor is induced by follicle-stihormone and cAMP. J. Biol. Chem. 2004, 279:16064 - 16070.
441.Stein, S. et al: NDRG1 is necessary for p53-dependent apoptosis. J. Biol. Chem. 2004, 279:48930 - 48940.
442.Tam, S.-Y. et al: RabGEF1 is a negative regulator of mast cell activation and skin inflammation. Nature Immunology. 2004, 5:844-852.
443.Tanaka, T. et al: Redox regulation of annexin 2 and its implications for oxidative stress-induced renal carcinogenesis and metastasis. Oncogene. 2004, 23:3980-3989.
444.Dong, G. et al: Metastatic squamous cell carcinoma cells that overexpress c-Met exhibit enhanced angiogenesis factor expression, scattering and metastasis in response to hepatocyte growth factor. Oncogene. 2004, 23:6199-6208.
445.Karp, C.M. et al: Identification of HRPAP20: A novel phosphoprotein that enhances growth and survival in hormone-responsive tumor cells. Cancer Research. 2004, 64:1016-1025.
446.Arnold, N.B. et al: Thioredoxin is downstream of Smad7 in a pathway that promotes growth and suppresses cisplatin-induced apoptosis in pancreatic cancer. Cancer Research. 2004, 64:3599-3606.
447.Fang, M.Z. et al: Over-expression of gastrin-releasing peptide in human esophageal squamous cell carcinomas. Carcinogenesis. 2004, 25:865-871.
448.Ha, S.-A. et al: Cancer-associated expression of minichromosome maintenance 3 gene in several human cancers and its involvement in tumorigenesis. Clinical Cancer Research. 2004, 10:8386-8395.
449.Mori, M. et al: Expression of apoptosis inhibitor protein Mcl1 linked to neuroprotection in CNS neurons. Cell Death and Differentiation. 2004, 11:1223-1233.
450.Li, S. et al: Preferential expression of hPGFS in primary SCCHN and tumour cell lines derived from respiratory and digestive organs. British Journal of Cancer. 2004, 90:1093-1099.
451.Bharti, S. et al: Novel membrane protein shrew-1 targets to cadherin-mediated junctions in polarized epithelial cells. Mol. Biol. of the Cell. 2004, 15:397-406.
452.Yang, S. and Liang, P.: Global analysis of gene expression by differential display - A mathematical model. Molecular Biotechnology. 2004, 27:197-208.
453.Shelton, R.C. et al: Differential expression of Pentraxin 3 in fibroblasts from patients with major depression. Neuropsychopharmacology. 2004, 29:126-132.
454.Begum, N.A. et al: Mycobacterium bovis BCG cell wall-specific differentially expressed genes identified by differential display and cDNA subtraction in human macrophages. Infection and Immunity. 2004, 72:937-948.
455.Brinks, H. et al: The repulsive guidance molecule RGMa is involved in the formation of afferent connections in the dentate gyrus. Journal of Neuroscience. 2004, 24:3862-3869.
456.Sokolowski, B.H.A. et al: Identification and localization of an arachidonic acid-sensitive potassium channel in the cochlea. Journal of Neuroscience. 2004, 24:6265-6276.
457.de Yebra L. et al: Reduced KIAA0471 mRNA expression in Alzheimer's patients: a new candidate gene product linked to the disease? Hum. Mol. Genet. 2004, 13:2607-2612.
458.Huang, H. et al: Downregulation of ATP synthase subunit-6, cytochrome c oxidase-III, and NADH dehydrogenase-3 by bright cyclic light in the rat retina. Invest. Ophthalmology & Vis. Sci. 2004, 45:2489-2496.
459.Xie, H. et al: Porphyromonas gingivalis genes involved in fimA regulation. Infection and Immunity. 2004, 72:651-658.
460.Jaleel, M.A. et al: Stromal cell-derived factor-1 (SDF-1) signalling regulates human placental trophoblast cell survival. Molecular Human Reproduction. 2004, 10:901-909.
461.Iida, H. et al: Molecular cloning of rat Spergen-3, a spermatogenic cell-specific gene-3, encoding a novel 75-kDa protein bearing EF-hand motifs. J. Andrology. 2004, 25:885-892.
462.Coupel, S. et al: RhoA activation mediates phosphatidylinositol 3-kinaseĐdependent proliferation of human vascular endothelial cells: An alloimmune mechanism of chronic allograft nephropathy. J. Am. Soc. Nephrology. 2004, 15:2429-2439.
463.Reiser, J. et al: Induction of B7-1 in podocytes is associated with nephrotic syndrome. J. Clin. Invest. 2004, 113:1390-1397.
464.Carlson, K.A. et al: Molecular characterization of a putative antiretroviral transcriptional factor, OTK18. J. Immunology. 2004, 172:381-391.
465.Shi, C. et al: Integrin engagement regulates monocyte differentiation through the forkhead transcription factor Foxp1. J. Clin. Invest. 2004, 114:408-418.
466.Mazel, A. et al: Induction of salt and osmotic stress tolerance by overexpression of an intracellular vesicle trafficking protein AtRab7 (AtRabG3e). Plant Physiology. 2004, 134:118-128.
467.Chandler, J.W. and Melzer, S.: An alpha-crystallin gene, ACD31.2 from Arabidopsis is negatively regulated by FPF1 overexpression, floral induction, gibberellins, and long days. J. Experimental Botany. 2004, 55:1433-1435.
468.Liu, X. and Baird, W.V.: Identification of a novel gene, HAABRC5, from Helianthus annuus (Asteraceae) that is upregulated in response to drought, salinity, and abscisic acid. Am. J. Botany. 2004, 91:184-191.
469.Woyke, T. et al: Differential gene expression in auristatin PHE-treated Cryptococcus neoformans. Antimicrobial Agents & Chemotherapy. 2004, 48:561-567.
470.Fukuhara, A. et al: Visfatin: A protein secreted by visceral fat that mimics the effects of insulin. Science. 2005, 307:426-430.
471.Thomas, E.K. et al: Endo180 binds to the c-terminal region of type I collagen. J. Biol. Chem., 2005, 280:22596-22605.
472.Sonkoly, E. et al: Identification and characterization of a novel, psoriasis susceptibility-related noncoding RNA gene, PRINS. J. Biol. Chem. 2005, 280:24159-24167.
473.Park, J.-H. et al: Identification of the genes involved in enhanced fenretinide-induced apoptosis by parthenolide in human hepatoma cells. Cancer Research. 2005, 65:2804-2814.
474.Jacques, C. et al: Two-step differential expression analysis reveals a new set of genes involved in thyroid oncocytic tumors. J. Clin. Endocrinology & Metabolism. 2005, 90:2314-2320.
475.Bardeesy, N. et al: Role of epidermal growth factor receptor signaling in RAS-driven melanoma. Mol. Cell. Biol. 2005, 25:4176-4188.
476.Yoo, Y.A. et al: Mitochondrial ribosomal protein L41 suppresses cell growth in association with p53 and p27Kip1. Mol. Cell. Biol. 2005, 25:6603-6616.
477.Zhang, H.M. et al: Gamma interferon-inducible protein 10 induces HeLa cell apoptosis through a p53-dependent pathway initiated by suppression of human papillomavirus type 18 E6 and E7 expression. Mol. Cell. Biol. 2005, 25:6247-6258.
478.Lin, J.-C. and Tarn, W.-Y.: Exon selection in alpha-Tropomyosin mRNA is regulated by the antagonistic action of RBM4 and PTB. Mol. Cell. Biol., 2005, 25:10111-10121.
479.Zhang, Y. et al: The human mineral dust-induced gene, mdig, is a cell growth regulating gene associated with lung cancer. Oncogene. 2005, 24:4873-4882.
480.Carles, A. et al: Head and neck squamous cell carcinoma transcriptome analysis by comprehensive validated differential display. Oncogene. 2005, 10.1038/sj.onc.1209203.
481.Komatsu, Y. et al: Retinol-binding protein gene is highly expressed in higher-order association areas of the primate neocortex. Cerebral Cortex. 2005, 15:96-108.
482.Panepinto, J. et al: The DEAD-box RNA helicase Vad1 regulates multiple virulence-associated genes in Cryptococcus neoformans. J. Clin. Invest. 2005, 115:632-641.
483.Zhou, S. et al: Identification of genes regulated by low temperature in Pachysandra terminalis Sieb. et Zucc using cDNA differential display. HortScience. 2005, 40:1995-1997.
484.O'Brien, M. et al: Lipid signaling in plants. Cloning and expression analysis of the obtusifoliol 14alpha-demethylase from Solanum chacoense Bitt., a pollination- and fertilization-induced gene with both obtusifoliol and lanosterol demethylase activity. Plant Physiology. 2005, 139:734-749.
485.Wade, F.M. et al: Differential expression of the peripheral benzodiazepine receptor and gremlin during adipogenesis. Obesity Res. 2005, 13:818-822.
486.Mutsuga, N. et al: Regulation of gene expression in magnocellular neurons in rat supraoptic nucleus during sustained hypoosmolality. Endocrinology. 2005, 146:1254-1267.
487.Hung, H.: Suppression of ps20 expression in the rat uterus by tamoxifen and estrogens. Endocrinology. 2005, 146:2388-2396.
488.Trevaskis, J. et al: Src Homology 3-domain growth factor receptor-bound 2-like (endophilin) interacting protein 1, a novel neuronal protein that regulates energy balance. Endocrinology. 2005, 146:3757-3764.
489.Paredes, A. et al: Loss of synaptonemal complex protein-1, a synaptonemal complex protein, contributes to the initiation of follicular assembly in the developing rat ovary. Endocrinology. 2005, 146:5267-5277.
490.Lamerant, N. and Kieda, C.: Adhesion properties of adhesion-regulating molecule 1 protein on endothelial cells. FEBS J. 2005, 272:1833-1844.
491.Meyer, J.N. et al: Differential display of hepatic mRNA from killifish (Fundulus heteroclitus) inhabiting a Superfund estuary. Aquatic Toxicology. 2005, 73:327-341.
492.Tang, D.C. et al: The hydroxyurea-induced small GTP-binding protein SAR modulates gamma-globin gene expression in human erythroid cells. Blood. 2005, 106:3256-3263.
493.Bonetta, L.: Gene expression: An expression of interest. Nature. 2006, 440:1233-1237.
494.Miki, Y. et al: Expression of the steroid and xenobiotic receptor and its possible target gene, organic anion transporting polypeptide-A, in human breast carcinoma. Cancer Research. 2006, 66:535-542.
495.Culjkovic, B. et al: eIF4E is a central node of an RNA regulon that governs cellular proliferation. J. Cell Biology. 2006, 175:415-426.
496.Ishimaru, N. et al: Novel role for RbAp48 in tissue-specific, estrogen deficiency-dependent apoptosis in the exocrine glands. Mol. Cell. Biol. 2006, 26:2924-2935.
497.Isachenko, N. et al: High expression of shMDG1 gene is associated with low metastatic potential of tumor cells. Oncogene. 2006, 25:317-322.
498.Mai, R.-T. et al: Hepatitis C virus core protein recruits nucleolar phophoprotein B23 and coactivator p300 to relieve the repression effect of transcriptional factor YY1 and B23 gene expression. Oncogene. 2006, 25:448-462.
499.Chen, J. et al: The carbonic anhydrase I locus contains a c-Myb target promoter and modulates differentiation of murine erythroleukemia cells. Oncogene. 2006, 25:2758 - 2772.
500.Chen, Y.-J. et al: DSG3 is overexpressed in head neck cancer and is a potential molecular target for inhibition of oncogenesis. Oncogene. 2006, DOI 10.1038/sj.onc.1209802.
501.Tong, S. et al: The activation of TC10, a Rho small GTPase, contributes to v-Rel-mediated transformation. Oncogene. 2006, DOI 10.1038/sj.onc.1210023.
502.Wang, S.-Z. et al: An oligodendrocyte-specific zinc-finger transcription regulator cooperates with Olig2 to promote oligodendrocyte differentiation. Development. 2006, 133:3389-3398.
503.Schnell, S. et al: Gimap4 accelerates T-cell death. Blood. 2006, 108:591-599.
504.Ishihata, A. and Katano, Y.: Investigation of differentially expressed genes in the ventricular myocardium of senescent rats. Ann. N.Y. Acad. Sci. 2006, 1067:142-151.
505.Matsuda, A. and Forney, J.D.: The SUMO pathway is developmentally regulated and required for programmed DNA elimination in Paramecium tetraurelia. Eukaryotic Cell. 2006, 5:806-815.
 
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